Assay Details
Target Gene Details
Entrez Gene ID: | 64223 |
Gene Name: | MTOR associated protein, LST8 homolog |
Gene Aliases: |
GBL, GbetaL, LST8, POP3, WAT1 |
Location: |
Chr.16:2205177-2209417 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
MLST8 | NM_001199173.1 | 1 | 251 | NP_001186102.1 |
NM_001199175.1 | 1 | 251 | NP_001186104.1 | |
NM_022372.4 | 1 | 251 | NP_071767.3 | |
XM_005255478.2 | 1 | 214 | XP_005255535.1 | |
XM_005255479.2 | 1 | 171 | XP_005255536.1 | |
XM_017023548.1 | 1 | 203 | XP_016879037.1 | |
XM_017023549.1 | XP_016879038.1 | |||
XM_017023551.1 | XP_016879040.1 | |||
AK021536.1 | 1 | 224 | ||
AK098762.1 | 1 | 186 | ||
AK302201.1 | ||||
AK304390.1 | ||||
AU117583.1 | 1 | 224 | ||
AY223837.1 | AAO73410.1 | |||
BC088354.1 | AAH88354.1 | |||
BI761765.1 | ||||
DA382215.1 | 1 | 251 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2422427 | Chr.16:10001 - 2723164 on Build GRCh38 | Duplication | NHLRC4 LOC729652 NME3 METRN IFT140 RNPS1 TMEM8A LUC7L HBQ1 ECI1 MPG MIR3177 LOC105371047 CAPN15 RAB11FIP3 MSLN NME4 PGP LINC00235 FBXL16 SNHG9 CCDC78 WFIKKN1 MIR4717 SSTR5 LOC100134368 LMF1 MIR4516 MIR3176 ATP6V0C MIR662 MLST8 NOXO1 TPSB2 SYNGR3 MCRIP2 HBM SOX8 LINC00254 AXIN1 SSTR5-AS1 LOC105371184 MIR6859-4 SPSB3 RPS2 PIGQ SNORA78 ARHGDIG HAGH HN1L EME2 WDR90 RNF151 FAM173A PKD1 ERVK13-1 WASIR2 MEIOB RHBDF1 RAB40C LOC105371038 SNORA64 C16orf59 KCTD5 STUB1 LMF1-AS1 METTL26 HBZ RAB26 MIR5587 MIR3677 ABCA17P NTHL1 RHOT2 CRAMP1 E4F1 PDIA2 RPL3L TBL3 RPL23AP5 NPW MIR3180-5 TSC2 FAHD1 FAM234A CLCN7 NPRL3 GFER FLJ42627 LOC101929280 ABCA3 CEMP1 SNORA10 TSR3 MSRB1 LOC652276 WDR24 HS3ST6 UNKL NDUFB10 GNG13 HAGHL MRPS34 TPSD1 TPSAB1 RGS11 MIR6768 DDX11L10 LOC105371049 RPUSD1 AMDHD2 PRR35 HBA1 LOC106660606 ZNF598 MIR6767 IGFALS MIR940 PDPK1 GNPTG CCDC154 CASKIN1 NTN3 NARFL LOC105371045 NUBP2 PRSS27 C1QTNF8 BRICD5 RHBDL1 TRAF7 SNORD60 TBC1D24 PTX4 CHTF18 TMEM204 MAPK8IP3 SLC9A3R2 CACNA1H CCNF MIR3178 DNASE1L2 BAIAP3 HBA2 C16orf91 JMJD8 SNHG19 LOC100287175 PRSS29P MRPL28 TPSG1 PRR25 POLR3K LOC105371046 MIR1225 MIR6511B1 SNRNP25 LOC107984876 LOC107987233 UBE2I DECR2 TELO2 |
nsv471072 | Chr.16:1971892 - 2317508 on Build GRCh38 | Loss | SNORD60 RNPS1 ECI1 SLC9A3R2 PKD1 DNASE1L2 LOC105371049 RAB26 SNHG19 MIR3677 PGP NTHL1 E4F1 LOC106660606 MIR4717 ZNF598 TBL3 MIR4516 MIR1225 MIR940 NPW MIR3180-5 TSC2 MIR6511B1 GFER MLST8 NOXO1 CASKIN1 ABCA3 SYNGR3 BRICD5 TRAF7 |
dgv4861n54 | Chr.16:2083900 - 2246850 on Build GRCh38 | Loss | E4F1 SNORD60 MIR4516 MIR1225 MIR3180-5 TSC2 ECI1 MIR6511B1 MLST8 PKD1 CASKIN1 DNASE1L2 LOC105371049 BRICD5 TRAF7 RAB26 SNHG19 PGP |
dgv4863n54 | Chr.16:2141733 - 2274302 on Build GRCh38 | Loss | E4F1 SNORD60 LOC106660606 RNPS1 MIR940 ECI1 MLST8 CASKIN1 DNASE1L2 BRICD5 TRAF7 RAB26 SNHG19 MIR3677 PGP |
nsv1711 | Chr.16:2199093 - 2232650 on Build GRCh38 | Insertion | E4F1 BRICD5 MLST8 PGP |
nsv457351 | Chr.16:2156590 - 2274302 on Build GRCh38 | Loss | E4F1 CASKIN1 DNASE1L2 LOC106660606 RNPS1 MIR940 BRICD5 ECI1 TRAF7 MIR3677 MLST8 PGP |
nsv1052260 | Chr.16:2074546 - 2629655 on Build GRCh38 | Gain | LOC729652 SNORD60 TBC1D24 RNPS1 ECI1 PKD1 MIR6768 CCNF MIR3178 DNASE1L2 LOC105371049 C16orf59 RAB26 AMDHD2 SNHG19 MIR3677 ABCA17P PGP E4F1 LOC106660606 MIR4717 MIR6767 MIR4516 MIR1225 MIR940 MIR3180-5 TSC2 ATP6V0C MIR6511B1 MLST8 PDPK1 CASKIN1 NTN3 ABCA3 CEMP1 BRICD5 LOC652276 TRAF7 |
nsv952902 | Chr.16:2143400 - 2339999 on Build GRCh38 | Deletion | E4F1 SNORD60 LOC106660606 MIR4717 RNPS1 MIR940 ECI1 MLST8 CASKIN1 DNASE1L2 ABCA3 BRICD5 TRAF7 RAB26 SNHG19 MIR3677 PGP |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |