Assay Details
Target Gene Details
Entrez Gene ID: | 84231 |
Gene Name: | TNF receptor associated factor 7 |
Gene Aliases: |
RFWD1, RNF119 |
Location: |
Chr.16:2155752-2178129 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TRAF7 | NM_032271.2 | NP_115647.2 | ||
XM_005255627.4 | XP_005255684.1 | |||
XM_011522700.1 | XP_011521002.1 | |||
AK090624.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2422427 | Chr.16:10001 - 2723164 on Build GRCh38 | Duplication | TSR3 NME4 CCNF KCTD5 EME2 MIR3677 LOC105371045 LOC107987233 NPRL3 NOXO1 CACNA1H PRSS29P HBA2 MPG MIR3177 PKD1 LOC105371184 UNKL HBM HS3ST6 FLJ42627 RAB11FIP3 PGP C16orf91 SOX8 TMEM204 MIR662 WFIKKN1 PDIA2 PRR25 FAM173A LOC105371047 RPS2 LOC106660606 CAPN15 ZNF598 RHOT2 SNORA10 MIR6859-4 CEMP1 MIR940 LUC7L MSRB1 MIR3178 LMF1-AS1 CCDC78 LOC100287175 NPW RPL23AP5 TMEM8A TBC1D24 BRICD5 CHTF18 LOC107984876 LOC105371038 PTX4 SYNGR3 MIR3180-5 RNPS1 HAGH TPSG1 RNF151 METRN MCRIP2 LINC00254 IGFALS MRPS34 FAHD1 AXIN1 MIR4516 RGS11 MSLN LOC100134368 C1QTNF8 NUBP2 NDUFB10 WDR24 MEIOB HN1L SNORD60 MIR6768 PIGQ LOC105371049 MIR4717 GNPTG E4F1 FBXL16 TPSAB1 MIR5587 DECR2 NHLRC4 DNASE1L2 LOC729652 MIR6511B1 RPL3L SNHG9 ARHGDIG NTHL1 C16orf59 UBE2I RAB40C POLR3K METTL26 LOC101929280 CCDC154 RHBDL1 SLC9A3R2 WASIR2 RPUSD1 SSTR5 TBL3 ECI1 NARFL HAGHL TSC2 GFER STUB1 MIR3176 CASKIN1 ABCA17P SSTR5-AS1 JMJD8 MRPL28 ERVK13-1 HBQ1 PRR35 CRAMP1 RAB26 TPSD1 NME3 CLCN7 AMDHD2 SNRNP25 SPSB3 NTN3 RHBDF1 MLST8 BAIAP3 ATP6V0C MIR1225 TPSB2 LOC105371046 ABCA3 MIR6767 WDR90 TELO2 DDX11L10 HBZ PRSS27 TRAF7 MAPK8IP3 FAM234A SNORA78 LINC00235 PDPK1 IFT140 LOC652276 SNORA64 SNHG19 GNG13 LMF1 HBA1 |
nsv471072 | Chr.16:1971892 - 2317508 on Build GRCh38 | Loss | LOC105371049 MIR4717 E4F1 NPW RAB26 BRICD5 MIR3677 DNASE1L2 MIR6511B1 SYNGR3 NOXO1 MIR3180-5 NTHL1 RNPS1 MLST8 MIR1225 PKD1 ABCA3 PGP MIR4516 SLC9A3R2 TRAF7 TBL3 LOC106660606 ECI1 ZNF598 MIR940 TSC2 GFER SNORD60 SNHG19 CASKIN1 |
dgv4861n54 | Chr.16:2083900 - 2246850 on Build GRCh38 | Loss | LOC105371049 E4F1 RAB26 PGP MIR4516 BRICD5 DNASE1L2 MIR6511B1 TRAF7 ECI1 MIR3180-5 MLST8 TSC2 MIR1225 SNORD60 PKD1 SNHG19 CASKIN1 |
dgv4863n54 | Chr.16:2141733 - 2274302 on Build GRCh38 | Loss | E4F1 RAB26 PGP BRICD5 MIR3677 DNASE1L2 TRAF7 LOC106660606 ECI1 RNPS1 MIR940 MLST8 SNORD60 SNHG19 CASKIN1 |
nsv457349 | Chr.16:2055054 - 2200730 on Build GRCh38 | Loss | TRAF7 LOC105371049 MIR3180-5 RAB26 MIR4516 TSC2 MIR1225 SNORD60 PKD1 SNHG19 CASKIN1 MIR6511B1 |
nsv457351 | Chr.16:2156590 - 2274302 on Build GRCh38 | Loss | TRAF7 LOC106660606 ECI1 E4F1 PGP RNPS1 MIR940 MLST8 BRICD5 MIR3677 DNASE1L2 CASKIN1 |
nsv1052260 | Chr.16:2074546 - 2629655 on Build GRCh38 | Gain | ABCA17P LOC105371049 MIR4717 E4F1 RAB26 CCNF TBC1D24 BRICD5 MIR3677 DNASE1L2 LOC729652 MIR6511B1 AMDHD2 NTN3 MIR3180-5 RNPS1 MLST8 ATP6V0C MIR1225 PKD1 C16orf59 ABCA3 MIR6767 PGP MIR4516 TRAF7 LOC106660606 ECI1 PDPK1 CEMP1 MIR940 TSC2 MIR3178 LOC652276 SNORD60 MIR6768 SNHG19 CASKIN1 |
nsv952902 | Chr.16:2143400 - 2339999 on Build GRCh38 | Deletion | ABCA3 MIR4717 E4F1 RAB26 PGP BRICD5 MIR3677 DNASE1L2 TRAF7 LOC106660606 ECI1 RNPS1 MIR940 MLST8 SNORD60 SNHG19 CASKIN1 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |