Assay Details
Target Gene Details
Entrez Gene ID: | 54715 |
Gene Name: | RNA binding protein, fox-1 homolog 1 |
Gene Aliases: |
2BP1, A2BP1, FOX-1, FOX1, HRNBP1 |
Location: |
Chr.16:5239749-7713343 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
RBFOX1 | XM_017023319.1 | XP_016878808.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1035156 | Chr.16:5091032 - 5996934 on Build GRCh38 | Gain | LINC01570 RBFOX1 MIR8065 EEF2KMT |
nsv1046986 | Chr.16:4049000 - 5555721 on Build GRCh38 | Gain | NMRAL1 PPL GLIS2 UBN1 ALG1 SRL SEC14L5 ZNF500 CORO7-PAM16 TFAP4 CORO7 MIR6769A C16orf96 C16orf71 LINC01569 C16orf89 ANKS3 ADCY9 RBFOX1 LOC105371063 NUDT16L1 ROGDI GLIS2-AS1 MGRN1 EEF2KMT GLYR1 DNAJA3 UBALD1 HMOX2 SEPT12 VASN NAGPA CDIP1 PAM16 NAGPA-AS1 SMIM22 |
nsv1045304 | Chr.16:5205761 - 5326875 on Build GRCh38 | Loss | RBFOX1 |
dgv2698n100 | Chr.16:5304641 - 5327717 on Build GRCh38 | Loss | RBFOX1 |
nsv1036241 | Chr.16:5271882 - 5387609 on Build GRCh38 | Loss | RBFOX1 |
esv34300 | Chr.16:5005938 - 5322534 on Build GRCh38 | Gain | RBFOX1 NAGPA EEF2KMT ALG1 NAGPA-AS1 C16orf89 SEC14L5 |
esv2760069 | Chr.16:4922849 - 5374828 on Build GRCh38 | Gain+Loss | RBFOX1 PPL NAGPA EEF2KMT ALG1 NAGPA-AS1 C16orf89 SEC14L5 |
nsv428318 | Chr.16:5011594 - 5374828 on Build GRCh38 | Gain | RBFOX1 NAGPA EEF2KMT ALG1 NAGPA-AS1 C16orf89 SEC14L5 |
esv2762021 | Chr.16:5293419 - 5377238 on Build GRCh38 | Loss | RBFOX1 |
nsv1037303 | Chr.16:5287645 - 5327595 on Build GRCh38 | Loss | RBFOX1 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |