Assay Details
Target Gene Details
Entrez Gene ID: | 8312 |
Gene Name: | axin 1 |
Gene Aliases: |
AXIN, PPP1R49 |
Location: |
Chr.16:287440-355226 on Build GRCh38 |
Assay Gene Location: | Within Intron 9 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
AXIN1 | NM_003502.3 | NP_003493.1 | ||
NM_181050.2 | NP_851393.1 | |||
NR_134879.1 | ||||
XM_011522682.2 | XP_011520984.1 | |||
XM_011522683.2 | XP_011520985.1 | |||
XM_011522684.2 | XP_011520986.1 | |||
XM_011522686.1 | XP_011520988.1 | |||
XM_017023743.1 | XP_016879232.1 | |||
XM_017023744.1 | XP_016879233.1 | |||
XM_017023745.1 | XP_016879234.1 | |||
XM_017023746.1 | XP_016879235.1 | |||
XM_017023747.1 | XP_016879236.1 | |||
XM_017023748.1 | XP_016879237.1 | |||
AB208876.1 | BAD92113.1 | |||
AF009674.1 | AAC51624.1 | |||
BC044648.1 | AAH44648.1 | |||
KF615847.1 | ||||
KF615848.1 | ||||
KF615849.1 | ||||
KF615850.1 | ||||
KF615851.1 | ||||
KF615852.1 | ||||
KF615853.1 | ||||
KF615854.1 | ||||
KU178413.1 | ||||
KU178414.1 | ||||
KU178415.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3637568 | Chr.16:300040 - 319624 on Build GRCh38 | Gain | AXIN1 |
esv2422427 | Chr.16:10001 - 2723164 on Build GRCh38 | Duplication | RHBDF1 MSLN MCRIP2 DNASE1L2 MIR5587 SOX8 NUBP2 TELO2 ZNF598 RPUSD1 NPW MRPL28 FAHD1 CAPN15 MIR4516 SNHG9 CACNA1H HAGHL DECR2 CHTF18 BRICD5 PKD1 MIR662 LUC7L MIR3176 FLJ42627 PTX4 SNORD60 LOC105371184 MIR940 GNPTG TRAF7 RAB11FIP3 LOC652276 NHLRC4 CASKIN1 RHOT2 NME3 TPSG1 JMJD8 PRSS27 SNHG19 DDX11L10 NTN3 NOXO1 HS3ST6 MIR6511B1 CRAMP1 LOC105371049 MPG HAGH CEMP1 FAM173A RNPS1 LOC101929280 HBM RHBDL1 TBL3 SSTR5 MIR6767 UBE2I LOC105371047 PIGQ ATP6V0C LOC105371038 SNORA78 NPRL3 ERVK13-1 ABCA17P EME2 RPS2 PRSS29P MEIOB ECI1 MIR3180-5 FAM234A NARFL SSTR5-AS1 WDR24 GFER C16orf91 HN1L PGP IGFALS C16orf59 AXIN1 HBA2 TBC1D24 MIR6859-4 MLST8 CLCN7 TMEM8A SNORA64 LMF1 LOC106660606 STUB1 SNORA10 LOC107987233 SYNGR3 MIR4717 WASIR2 LOC100134368 LOC107984876 HBZ LINC00235 TMEM204 TSC2 BAIAP3 NME4 NDUFB10 LOC100287175 TSR3 RPL23AP5 C1QTNF8 ARHGDIG LOC105371045 CCDC78 MIR6768 MIR3677 HBA1 SNRNP25 MRPS34 MIR3178 HBQ1 TPSB2 CCDC154 LOC729652 TPSD1 SLC9A3R2 LMF1-AS1 UNKL RAB26 RPL3L KCTD5 SPSB3 METTL26 MAPK8IP3 NTHL1 E4F1 TPSAB1 POLR3K PRR35 PDIA2 WDR90 METRN RNF151 PDPK1 MSRB1 ABCA3 LINC00254 CCNF LOC105371046 PRR25 RAB40C IFT140 FBXL16 MIR3177 AMDHD2 MIR1225 WFIKKN1 RGS11 GNG13 |
dgv769e212 | Chr.16:301730 - 308308 on Build GRCh38 | Loss | AXIN1 |
esv3637564 | Chr.16:287941 - 370218 on Build GRCh38 | Gain | AXIN1 MRPL28 |
nsv952896 | Chr.16:273501 - 321500 on Build GRCh38 | Deletion | PDIA2 AXIN1 ARHGDIG RGS11 |
esv3637563 | Chr.16:263248 - 505590 on Build GRCh38 | Gain | RPL23AP5 FAM234A PDIA2 RAB11FIP3 AXIN1 DECR2 ARHGDIG LOC100134368 TMEM8A RGS11 NME4 MRPL28 |
nsv570951 | Chr.16:279671 - 322597 on Build GRCh38 | Loss | PDIA2 AXIN1 ARHGDIG |
dgv32n68 | Chr.16:245507 - 476226 on Build GRCh38 | Loss | RPL23AP5 FAM234A PDIA2 RAB11FIP3 AXIN1 DECR2 ARHGDIG LOC100134368 TMEM8A RGS11 NME4 MRPL28 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |