Assay Details
Target Gene Details
Entrez Gene ID: | 9717 |
Gene Name: | SEC14 like lipid binding 5 |
Gene Aliases: |
PRELID4B |
Location: |
Chr.16:4958317-5019155 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SEC14L5 | NM_014692.1 | NP_055507.1 | ||
AB007880.2 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3892763 | Chr.16:4971982 - 4977763 on Build GRCh38 | Loss | SEC14L5 |
esv2750431 | Chr.16:4973232 - 4973625 on Build GRCh38 | Deletion | SEC14L5 |
nsv1042612 | Chr.16:4965694 - 5150514 on Build GRCh38 | Loss | C16orf89 NAGPA EEF2KMT NAGPA-AS1 SEC14L5 ALG1 |
nsv528586 | Chr.16:4951303 - 5021669 on Build GRCh38 | Gain | SEC14L5 |
esv3892762 | Chr.16:4967386 - 5060625 on Build GRCh38 | Gain | C16orf89 NAGPA NAGPA-AS1 SEC14L5 |
esv3637714 | Chr.16:4958035 - 5079276 on Build GRCh38 | Gain | C16orf89 NAGPA NAGPA-AS1 SEC14L5 ALG1 |
esv3637713 | Chr.16:4957958 - 5307305 on Build GRCh38 | Gain | C16orf89 NAGPA EEF2KMT NAGPA-AS1 SEC14L5 RBFOX1 ALG1 |
esv25186 | Chr.16:4858500 - 5142800 on Build GRCh38 | Gain | C16orf89 NAGPA UBN1 EEF2KMT NAGPA-AS1 SEC14L5 PPL ALG1 |
esv2761893 | Chr.16:4941276 - 4995458 on Build GRCh38 | Loss | SEC14L5 |
esv2422516 | Chr.16:4775920 - 5160979 on Build GRCh38 | Deletion | C16orf89 NAGPA UBN1 EEF2KMT NAGPA-AS1 GLYR1 SMIM22 SEC14L5 PPL SEPT12 ALG1 ROGDI |
nsv1046986 | Chr.16:4049000 - 5555721 on Build GRCh38 | Gain | C16orf89 UBN1 EEF2KMT MGRN1 SEC14L5 SRL HMOX2 SEPT12 NAGPA CORO7 C16orf71 ADCY9 NMRAL1 TFAP4 ROGDI NAGPA-AS1 GLYR1 SMIM22 CDIP1 GLIS2-AS1 ANKS3 ZNF500 GLIS2 LOC105371063 LINC01569 NUDT16L1 DNAJA3 PAM16 RBFOX1 PPL CORO7-PAM16 VASN MIR6769A ALG1 C16orf96 UBALD1 |
esv2750432 | Chr.16:4973314 - 4973510 on Build GRCh38 | Deletion | SEC14L5 |
nsv457360 | Chr.16:4960912 - 5284683 on Build GRCh38 | Loss | C16orf89 NAGPA EEF2KMT NAGPA-AS1 SEC14L5 RBFOX1 ALG1 |
esv2760069 | Chr.16:4922849 - 5374828 on Build GRCh38 | Gain+Loss | C16orf89 NAGPA EEF2KMT NAGPA-AS1 SEC14L5 RBFOX1 PPL ALG1 |
More Information
Additional Information:
For this assay, SNP(s) [rs150801469] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |