Assay Details
Target Gene Details
Entrez Gene ID: | 113146 |
Gene Name: | AHNAK nucleoprotein 2 |
Gene Aliases: |
C14orf78 |
Location: |
Chr.14:104937253-104978357 on Build GRCh38 |
Assay Gene Location: | Within Exon 8 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
AHNAK2 | NM_138420.2 | 7 | 17866 | NP_612429.2 |
XM_005267299.1 | 7 | 17719 | XP_005267356.1 | |
AB095939.1 | 1 | 8767 | BAC23115.1 | |
AK095704.1 | 1 | 1666 | ||
AK126472.1 | 1 | 4348 | ||
AL834367.1 | 1 | 2910 | CAD39030.1 | |
BC011859.2 | 1 | 1568 | AAH11859.2 | |
BC033372.1 | 1 | 1474 | AAH33372.1 | |
BC049216.1 | 1 | 1908 | AAH49216.1 | |
BC090889.1 | 3 | 2984 | AAH90889.1 | |
BX537923.1 | 1 | 3748 | CAD97904.1 | |
BX538040.1 | 1 | 3522 | CAD97981.1 | |
BX538106.1 | 1 | 3988 | CAD98019.1 | |
BX538133.1 | 1 | 3409 | CAD98034.1 |
Target Gene Details
Entrez Gene ID: | 122618 |
Gene Name: | phospholipase D family member 4 |
Gene Aliases: |
C14orf175 |
Location: |
Chr.14:104924806-104937789 on Build GRCh38 |
Assay Gene Location: | Within Exon 12 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PLD4 | XM_011536411.2 | 11 | 2084 | XP_011534713.1 |
XM_017020965.1 | 11 | 1973 | XP_016876454.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv566139 | Chr.14:104880959 - 104950810 on Build GRCh38 | Loss | AHNAK2 PLD4 CEP170B |
nsv566099 | Chr.14:104818822 - 104946204 on Build GRCh38 | Gain | AHNAK2 PLD4 LINC00638 CEP170B |
esv25274 | Chr.14:104934334 - 104953760 on Build GRCh38 | Gain | AHNAK2 PLD4 |
nsv952276 | Chr.14:104922864 - 105021963 on Build GRCh38 | Deletion | AHNAK2 PLD4 CDCA4 C14orf79 |
nsv1049253 | Chr.14:104918622 - 105005518 on Build GRCh38 | Gain | AHNAK2 PLD4 C14orf79 |
nsv1054574 | Chr.14:103210111 - 105365114 on Build GRCh38 | Loss | LOC105370687 LOC101929634 LOC388022 BRF1 EIF5 LINC00637 C14orf79 TRMT61A PPP1R13B AKT1 MIR203A ASPG LOC105370691 TMEM179 PLD4 LOC107984648 CEP170B MIR4710 XRCC3 MARK3 KLC1 PACS2 AHNAK2 APOPT1 CDCA4 LOC105370708 ZBTB42 ADSSL1 BAG5 LINC00638 LOC102723354 SNORA28 LOC105378183 KIF26A ZFYVE21 SIVA1 RD3L TDRD9 GPR132 C14orf180 MIR6765 JAG2 MIR203B BTBD6 C14orf2 CKB INF2 NUDT14 |
More Information
Additional Information:
For this assay, SNP(s) [rs79161962] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |