Assay Details
Target Gene Details
Entrez Gene ID: | 221178 |
Gene Name: | spermatogenesis associated 13 |
Gene Aliases: |
ARHGEF29, ASEF2 |
Location: |
Chr.13:23979626-24307074 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SPATA13 | NM_001286792.1 | NP_001273721.1 | ||
NR_104595.1 | ||||
BX648244.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv525965 | Chr.13:22937442 - 24358507 on Build GRCh38 | Gain | TNFRSF19 SGCG ANKRD20A19P SACS-AS1 MIR2276 LINC00566 LINC00327 SPATA13 NUS1P3 MIPEP C1QTNF9B C1QTNF9B-AS1 SPATA13-AS1 C1QTNF9 SACS |
nsv561338 | Chr.13:23901934 - 24051027 on Build GRCh38 | Gain | SPATA13 ANKRD20A19P |
nsv561292 | Chr.13:23025847 - 24348376 on Build GRCh38 | Loss | TNFRSF19 SGCG ANKRD20A19P SACS-AS1 MIR2276 LINC00566 LINC00327 SPATA13 NUS1P3 MIPEP C1QTNF9B C1QTNF9B-AS1 SPATA13-AS1 C1QTNF9 SACS |
dgv3084n54 | Chr.13:22925582 - 24378278 on Build GRCh38 | Gain | TNFRSF19 SGCG ANKRD20A19P SACS-AS1 MIR2276 LINC00566 LINC00327 SPATA13 NUS1P3 MIPEP C1QTNF9B C1QTNF9B-AS1 SPATA13-AS1 C1QTNF9 SACS |
esv3892311 | Chr.13:22674660 - 24411768 on Build GRCh38 | Gain | TNFRSF19 SGCG ANKRD20A19P LOC105370109 BASP1P1 SACS-AS1 MIR2276 LINC00566 LINC00327 SPATA13 NUS1P3 MIPEP C1QTNF9B C1QTNF9B-AS1 LINC00621 SPATA13-AS1 C1QTNF9 SACS |
esv3631540 | Chr.13:24011626 - 24381597 on Build GRCh38 | Gain | LINC00566 SPATA13 NUS1P3 SPATA13-AS1 MIR2276 C1QTNF9 |
dgv1615n100 | Chr.13:22930769 - 24362849 on Build GRCh38 | Gain | TNFRSF19 SGCG ANKRD20A19P SACS-AS1 MIR2276 LINC00566 LINC00327 SPATA13 NUS1P3 MIPEP C1QTNF9B C1QTNF9B-AS1 SPATA13-AS1 C1QTNF9 SACS |
esv2751136 | Chr.13:22982261 - 24393377 on Build GRCh38 | Loss | TNFRSF19 SGCG ANKRD20A19P SACS-AS1 MIR2276 LINC00566 LINC00327 SPATA13 NUS1P3 MIPEP C1QTNF9B C1QTNF9B-AS1 SPATA13-AS1 C1QTNF9 SACS |
nsv1052089 | Chr.13:24009607 - 24031661 on Build GRCh38 | Loss | SPATA13 |
esv3580576 | Chr.13:22945778 - 24362710 on Build GRCh38 | Loss | TNFRSF19 SGCG ANKRD20A19P SACS-AS1 MIR2276 LINC00566 LINC00327 SPATA13 NUS1P3 MIPEP C1QTNF9B C1QTNF9B-AS1 SPATA13-AS1 C1QTNF9 SACS |
esv2422502 | Chr.13:22755560 - 24382791 on Build GRCh38 | Duplication | TNFRSF19 SGCG ANKRD20A19P LOC105370109 BASP1P1 SACS-AS1 MIR2276 LINC00566 LINC00327 SPATA13 NUS1P3 MIPEP C1QTNF9B C1QTNF9B-AS1 LINC00621 SPATA13-AS1 C1QTNF9 SACS |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |