Assay Details
Target Gene Details
Entrez Gene ID: | 1649 |
Gene Name: | DNA damage inducible transcript 3 |
Gene Aliases: |
CEBPZ, CHOP, CHOP-10, CHOP10, GADD153 |
Location: |
Chr.12:57516588-57520517 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
DDIT3 | NM_001195053.1 | NP_001181982.1 | ||
NM_001195054.1 | NP_001181983.1 | |||
NM_001195055.1 | NP_001181984.1 | |||
NM_001195056.1 | NP_001181985.1 | |||
NM_001195057.1 | NP_001181986.1 | |||
NM_004083.5 | NP_004074.2 | |||
AA054097.1 | ||||
AA476561.1 | ||||
AK316581.1 | ||||
AV729744.1 | ||||
AY461580.1 | ||||
BC003637.2 | AAH03637.1 | |||
BM464290.1 | ||||
BU664077.1 | ||||
CN482428.1 | ||||
S40706.1 | AAB22646.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv428283 | Chr.12:57435950 - 57608085 on Build GRCh38 | Gain | GLI1 DCTN2 DTX3 INHBE MBD6 ARHGAP9 PIP4K2C MIR6758 INHBC MARS KIF5A DDIT3 MIR616 |
nsv559034 | Chr.12:57466149 - 57618450 on Build GRCh38 | Loss | ARHGEF25 GLI1 DCTN2 DTX3 LOC101927583 MBD6 ARHGAP9 PIP4K2C MIR6758 MARS KIF5A DDIT3 MIR616 |
nsv469411 | Chr.12:57450266 - 57527405 on Build GRCh38 | Loss | GLI1 INHBE MBD6 ARHGAP9 DDIT3 MIR616 MIR6758 INHBC MARS |
nsv559036 | Chr.12:57517429 - 57522259 on Build GRCh38 | Loss | MBD6 DDIT3 MIR616 |
nsv482992 | Chr.12:56206217 - 57706217 on Build GRCh38 | Gain+Loss | ARHGEF25 GLI1 APOF CS RNF41 STAT2 IL23A ANKRD52 SNORA105C RBMS2 DDIT3 STAT6 SNORD59B B4GALNT1 NEMP1 GPR182 RDH16 LRP1 INHBC ZBTB39 PAN2 NAB2 PTGES3 SHMT2 PRIM1 MIR616 SNORD59A SLC26A10 CNPY2 STAC3 DTX3 LOC101927583 NACA MBD6 PIP4K2C ATP5B MIR6758 COQ10A LRP1-AS SPRYD4 NABP2 R3HDM2 NXPH4 MIP OS9 NDUFA4L2 DCTN2 INHBE ARHGAP9 GLS2 BAZ2A MIR1228 HSD17B6 MARS MYO1A SLC39A5 HBCBP TIMELESS KIF5A SDR9C7 TAC3 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |