Assay Details
Target Gene Details
Entrez Gene ID: | 10522 |
Gene Name: | DEAF1, transcription factor |
Gene Aliases: |
MRD24, NUDR, SPN, ZMYND5 |
Location: |
Chr.11:644220-695754 on Build GRCh38 |
Assay Gene Location: | Within Intron 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
DEAF1 | NM_001293634.1 | NP_001280563.1 | ||
NM_021008.3 | NP_066288.2 | |||
XM_011519842.2 | XP_011518144.1 | |||
AB209831.1 | BAD93068.1 | |||
AF007165.1 | AAB62704.1 | |||
AF049459.1 | AAC79676.1 | |||
AF049460.1 | AAC79677.1 | |||
AF068892.1 | AAC25714.1 | |||
AF068893.1 | AAC25715.1 | |||
AF068894.1 | AAC25716.1 | |||
AF068895.1 | AAC25717.1 | |||
AF068896.1 | AAC25718.1 | |||
AF068897.1 | AAC25719.1 | |||
AK289873.1 | ||||
AK291383.1 | ||||
BC053322.1 | AAH53322.1 | |||
FJ985253.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv469923 | Chr.11:378188 - 1302334 on Build GRCh38 | Loss | MUC5B PIDD1 LOC101927503 CDHR5 PKP3 SIGIRR MUC5AC LRRC56 TMEM80 IRF7 PDDC1 RPLP2 TALDO1 DEAF1 LMNTD2 MIR210HG LOC171391 CD151 PHRF1 SLC25A22 CHID1 SCT TOLLIP DRD4 PANO1 LOC101059906 TSPAN4 SNORA52 LOC143666 MIR6744 PNPLA2 ANO9 RASSF7 MUC2 AP2A2 EPS8L2 CEND1 CRACR2B POLR2L B4GALNT4 HRAS PTDSS2 MUC6 MIR210 RNH1 |
nsv552861 | Chr.11:589246 - 662407 on Build GRCh38 | Loss | CDHR5 DEAF1 SCT DRD4 PHRF1 IRF7 |
nsv832043 | Chr.11:631027 - 758602 on Build GRCh38 | Loss | TALDO1 DEAF1 EPS8L2 DRD4 TMEM80 |
esv2759794 | Chr.11:409846 - 1336162 on Build GRCh38 | Loss | MUC5B PIDD1 LOC101927503 CDHR5 SIGIRR MUC5AC LRRC56 TMEM80 IRF7 PDDC1 RPLP2 TALDO1 DEAF1 LMNTD2 MIR210HG LOC171391 CD151 PHRF1 SLC25A22 CHID1 SCT TOLLIP DRD4 PANO1 LOC101059906 TSPAN4 SNORA52 LOC143666 MIR6744 PNPLA2 ANO9 RASSF7 MUC2 AP2A2 EPS8L2 CEND1 CRACR2B POLR2L HRAS TOLLIP-AS1 PTDSS2 MUC6 MIR210 RNH1 |
nsv1039558 | Chr.11:534242 - 672091 on Build GRCh38 | Gain | CDHR5 SCT DRD4 LRRC56 IRF7 LOC143666 RASSF7 DEAF1 LMNTD2 MIR210HG PHRF1 HRAS MIR210 |
nsv1053964 | Chr.11:491334 - 692433 on Build GRCh38 | Gain | CDHR5 SCT DRD4 LOC101059906 LRRC56 IRF7 LOC143666 RASSF7 DEAF1 LMNTD2 MIR210HG PHRF1 HRAS PTDSS2 MIR210 RNH1 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | PIDD1 CDHR5 PKP3 SIGIRR LRRC56 TMEM80 IRF7 PDDC1 RPLP2 TALDO1 DEAF1 LMNTD2 MIR210HG LOC171391 CD151 PHRF1 SLC25A22 CHID1 SCT DRD4 PANO1 LOC101059906 TSPAN4 SNORA52 LOC143666 PNPLA2 ANO9 RASSF7 AP2A2 EPS8L2 CEND1 CRACR2B POLR2L B4GALNT4 HRAS PTDSS2 MIR210 RNH1 |
dgv1525n54 | Chr.11:647869 - 688312 on Build GRCh38 | Loss | DEAF1 |
nsv1159791 | Chr.11:461793 - 909492 on Build GRCh38 | Deletion | PIDD1 CDHR5 LRRC56 TMEM80 IRF7 PDDC1 RPLP2 TALDO1 DEAF1 LMNTD2 MIR210HG LOC171391 CD151 PHRF1 SLC25A22 CHID1 SCT DRD4 PANO1 LOC101059906 TSPAN4 SNORA52 LOC143666 PNPLA2 RASSF7 EPS8L2 CEND1 CRACR2B POLR2L HRAS PTDSS2 MIR210 RNH1 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |