Assay Details
Target Gene Details
Entrez Gene ID: | 10522 |
Gene Name: | DEAF1, transcription factor |
Gene Aliases: |
MRD24, NUDR, SPN, ZMYND5 |
Location: |
Chr.11:644220-695754 on Build GRCh38 |
Assay Gene Location: | Within Intron 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
DEAF1 | NM_001293634.1 | NP_001280563.1 | ||
NM_021008.3 | NP_066288.2 | |||
XM_011519842.2 | XP_011518144.1 | |||
AB209831.1 | BAD93068.1 | |||
AF007165.1 | AAB62704.1 | |||
AF049459.1 | AAC79676.1 | |||
AF049460.1 | AAC79677.1 | |||
AF068892.1 | AAC25714.1 | |||
AF068893.1 | AAC25715.1 | |||
AF068894.1 | AAC25716.1 | |||
AF068895.1 | AAC25717.1 | |||
AF068896.1 | AAC25718.1 | |||
AF068897.1 | AAC25719.1 | |||
AK289873.1 | ||||
AK291383.1 | ||||
BC053322.1 | AAH53322.1 | |||
FJ985253.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv469923 | Chr.11:378188 - 1302334 on Build GRCh38 | Loss | TSPAN4 CDHR5 RASSF7 TALDO1 LOC101059906 CHID1 LMNTD2 MUC6 CEND1 SLC25A22 MUC5B LOC171391 PHRF1 POLR2L MUC2 SNORA52 AP2A2 TMEM80 CRACR2B PTDSS2 MUC5AC PKP3 LRRC56 PNPLA2 PDDC1 EPS8L2 PANO1 LOC143666 SCT RNH1 SIGIRR MIR6744 MIR210HG MIR210 ANO9 B4GALNT4 IRF7 LOC101927503 RPLP2 DRD4 CD151 HRAS TOLLIP PIDD1 DEAF1 |
nsv832043 | Chr.11:631027 - 758602 on Build GRCh38 | Loss | DRD4 TMEM80 TALDO1 EPS8L2 DEAF1 |
esv2759794 | Chr.11:409846 - 1336162 on Build GRCh38 | Loss | TSPAN4 CDHR5 RASSF7 TALDO1 LOC101059906 CHID1 LMNTD2 MUC6 CEND1 SLC25A22 MUC5B LOC171391 PHRF1 TOLLIP-AS1 POLR2L MUC2 SNORA52 AP2A2 TMEM80 CRACR2B PTDSS2 MUC5AC LRRC56 PNPLA2 PDDC1 EPS8L2 PANO1 LOC143666 SCT RNH1 SIGIRR MIR6744 MIR210HG MIR210 ANO9 IRF7 LOC101927503 RPLP2 DRD4 CD151 HRAS TOLLIP PIDD1 DEAF1 |
nsv1039558 | Chr.11:534242 - 672091 on Build GRCh38 | Gain | LOC143666 SCT CDHR5 RASSF7 LMNTD2 MIR210HG MIR210 IRF7 PHRF1 DRD4 HRAS LRRC56 DEAF1 |
nsv1053964 | Chr.11:491334 - 692433 on Build GRCh38 | Gain | LOC143666 SCT RNH1 CDHR5 RASSF7 LOC101059906 LMNTD2 MIR210HG MIR210 IRF7 PHRF1 DRD4 HRAS PTDSS2 LRRC56 DEAF1 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | TSPAN4 CDHR5 RASSF7 TALDO1 LOC101059906 CHID1 LMNTD2 CEND1 SLC25A22 LOC171391 PHRF1 POLR2L SNORA52 AP2A2 TMEM80 CRACR2B PTDSS2 PKP3 LRRC56 PNPLA2 PDDC1 EPS8L2 PANO1 LOC143666 SCT RNH1 SIGIRR MIR210HG MIR210 ANO9 B4GALNT4 IRF7 RPLP2 DRD4 CD151 HRAS PIDD1 DEAF1 |
dgv1525n54 | Chr.11:647869 - 688312 on Build GRCh38 | Loss | DEAF1 |
nsv1159791 | Chr.11:461793 - 909492 on Build GRCh38 | Deletion | TSPAN4 CDHR5 RASSF7 TALDO1 LOC101059906 CHID1 LMNTD2 CEND1 SLC25A22 LOC171391 PHRF1 POLR2L SNORA52 TMEM80 CRACR2B PTDSS2 LRRC56 PNPLA2 PDDC1 EPS8L2 PANO1 LOC143666 SCT RNH1 MIR210HG MIR210 IRF7 RPLP2 DRD4 CD151 HRAS PIDD1 DEAF1 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |