Assay Details
Target Gene Details
Entrez Gene ID: | 59307 |
Gene Name: | single Ig and TIR domain containing |
Gene Aliases: |
IL-1R8, TIR8 |
Location: |
Chr.11:405716-417454 on Build GRCh38 |
Assay Gene Location: | Within Intron 9 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SIGIRR | NM_001135053.1 | NP_001128525.1 | ||
NM_001135054.1 | NP_001128526.1 | |||
NM_021805.2 | NP_068577.2 | |||
XM_005253044.2 | XP_005253101.1 | |||
XM_005253045.1 | XP_005253102.1 | |||
XM_005253046.1 | XP_005253103.1 | |||
XM_005253048.4 | XP_005253105.1 | |||
XM_017018099.1 | XP_016873588.1 | |||
XM_017018100.1 | XP_016873589.1 | |||
AK025099.1 | BAB15066.1 | |||
AK093427.1 | 6 | 1227 | ||
AK172830.1 | BAD18795.1 | |||
AY358342.1 | AAQ88708.1 | |||
BC003591.1 | AAH03591.1 | |||
BC025953.1 | AAH25953.1 | |||
BC106007.1 | AAI06008.1 | |||
BX369506.2 | ||||
CR457338.1 | CAG33619.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv527327 | Chr.11:295343 - 620599 on Build GRCh38 | Loss | SIGIRR LOC143666 LRRC56 LMNTD2 CDHR5 MIR210 PKP3 HRAS PTDSS2 IFITM2 IFITM1 B4GALNT4 IRF7 MIR210HG IFITM5 PHRF1 IFITM3 RASSF7 RNH1 PGGHG LOC101059906 ANO9 |
nsv469923 | Chr.11:378188 - 1302334 on Build GRCh38 | Loss | SNORA52 SIGIRR RPLP2 LOC143666 LOC101927503 LMNTD2 CRACR2B HRAS MIR6744 IRF7 AP2A2 PNPLA2 MUC5B CEND1 RNH1 LOC101059906 TOLLIP LRRC56 CDHR5 MUC6 MIR210 EPS8L2 PKP3 POLR2L PTDSS2 TALDO1 LOC171391 TSPAN4 CHID1 B4GALNT4 MUC5AC MIR210HG SCT MUC2 PHRF1 TMEM80 CD151 PANO1 SLC25A22 PIDD1 RASSF7 PDDC1 ANO9 DEAF1 DRD4 |
nsv552776 | Chr.11:366710 - 432436 on Build GRCh38 | Loss | SIGIRR PKP3 B4GALNT4 ANO9 |
nsv951268 | Chr.11:368601 - 503700 on Build GRCh38 | Deletion | SIGIRR PKP3 PTDSS2 RNH1 B4GALNT4 ANO9 |
nsv552770 | Chr.11:356090 - 444628 on Build GRCh38 | Gain | SIGIRR PKP3 B4GALNT4 ANO9 |
dgv1505n54 | Chr.11:198510 - 470331 on Build GRCh38 | Gain | SIGIRR PSMD13 SIRT3 PKP3 PTDSS2 RIC8A IFITM2 IFITM1 B4GALNT4 NLRP6 BET1L MIR6743 ODF3 IFITM5 IFITM3 PGGHG ANO9 |
nsv1159790 | Chr.11:340219 - 491334 on Build GRCh38 | Deletion | SIGIRR PKP3 PTDSS2 B4GALNT4 ANO9 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | SNORA52 SIGIRR RPLP2 LOC143666 LMNTD2 CRACR2B HRAS IRF7 AP2A2 PNPLA2 CEND1 RNH1 LOC101059906 LRRC56 CDHR5 MIR210 EPS8L2 PKP3 POLR2L PTDSS2 TALDO1 LOC171391 TSPAN4 CHID1 B4GALNT4 MIR210HG SCT PHRF1 TMEM80 CD151 PANO1 SLC25A22 PIDD1 RASSF7 PDDC1 ANO9 DEAF1 DRD4 |
nsv552822 | Chr.11:403545 - 408352 on Build GRCh38 | Loss | SIGIRR PKP3 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |