Assay Details
Target Gene Details
Entrez Gene ID: | 59307 |
Gene Name: | single Ig and TIR domain containing |
Gene Aliases: |
IL-1R8, TIR8 |
Location: |
Chr.11:405716-417454 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SIGIRR | NM_001135053.1 | NP_001128525.1 | ||
NM_021805.2 | NP_068577.2 | |||
XM_005253045.1 | XP_005253102.1 | |||
XM_005253046.1 | XP_005253103.1 | |||
AK025099.1 | BAB15066.1 | |||
AK093427.1 | ||||
AK172830.1 | BAD18795.1 | |||
BC025953.1 | AAH25953.1 | |||
DA963481.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv527327 | Chr.11:295343 - 620599 on Build GRCh38 | Loss | LRRC56 B4GALNT4 IFITM1 SIGIRR RNH1 CDHR5 IFITM2 IFITM3 HRAS LMNTD2 PGGHG IFITM5 ANO9 IRF7 MIR210HG PHRF1 RASSF7 PTDSS2 LOC101059906 LOC143666 MIR210 PKP3 |
nsv469923 | Chr.11:378188 - 1302334 on Build GRCh38 | Loss | LRRC56 PANO1 B4GALNT4 TALDO1 LOC171391 SIGIRR RNH1 DRD4 AP2A2 CDHR5 PNPLA2 TMEM80 LMNTD2 MUC5B TOLLIP RPLP2 SNORA52 DEAF1 IRF7 MIR210HG PDDC1 RASSF7 LOC101059906 CHID1 PIDD1 MIR6744 EPS8L2 MUC6 SLC25A22 CRACR2B TSPAN4 POLR2L HRAS MUC5AC ANO9 PHRF1 PTDSS2 MUC2 SCT CD151 LOC143666 LOC101927503 MIR210 CEND1 PKP3 |
nsv552776 | Chr.11:366710 - 432436 on Build GRCh38 | Loss | B4GALNT4 ANO9 SIGIRR PKP3 |
nsv552826 | Chr.11:412626 - 431606 on Build GRCh38 | Gain | ANO9 SIGIRR |
nsv552825 | Chr.11:412505 - 431554 on Build GRCh38 | Gain+Loss | ANO9 SIGIRR |
esv2759794 | Chr.11:409846 - 1336162 on Build GRCh38 | Loss | LRRC56 PANO1 TALDO1 LOC171391 SIGIRR RNH1 DRD4 AP2A2 CDHR5 PNPLA2 TMEM80 LMNTD2 MUC5B TOLLIP RPLP2 SNORA52 DEAF1 IRF7 MIR210HG PDDC1 RASSF7 LOC101059906 CHID1 PIDD1 MIR6744 EPS8L2 MUC6 SLC25A22 CRACR2B TSPAN4 POLR2L HRAS MUC5AC ANO9 PHRF1 PTDSS2 TOLLIP-AS1 MUC2 SCT CD151 LOC143666 LOC101927503 MIR210 CEND1 |
esv3891907 | Chr.11:409815 - 424291 on Build GRCh38 | Loss | ANO9 SIGIRR |
nsv951268 | Chr.11:368601 - 503700 on Build GRCh38 | Deletion | B4GALNT4 ANO9 PTDSS2 SIGIRR RNH1 PKP3 |
nsv552770 | Chr.11:356090 - 444628 on Build GRCh38 | Gain | B4GALNT4 ANO9 SIGIRR PKP3 |
dgv1505n54 | Chr.11:198510 - 470331 on Build GRCh38 | Gain | ODF3 B4GALNT4 BET1L IFITM1 SIGIRR IFITM2 IFITM3 RIC8A PGGHG NLRP6 PSMD13 IFITM5 ANO9 MIR6743 PTDSS2 SIRT3 PKP3 |
nsv1159790 | Chr.11:340219 - 491334 on Build GRCh38 | Deletion | B4GALNT4 ANO9 PTDSS2 SIGIRR PKP3 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | LRRC56 PANO1 B4GALNT4 TALDO1 LOC171391 SIGIRR RNH1 DRD4 AP2A2 CDHR5 PNPLA2 TMEM80 LMNTD2 RPLP2 SNORA52 DEAF1 IRF7 MIR210HG PDDC1 RASSF7 LOC101059906 CHID1 PIDD1 EPS8L2 SLC25A22 CRACR2B TSPAN4 POLR2L HRAS ANO9 PHRF1 PTDSS2 SCT CD151 LOC143666 MIR210 CEND1 PKP3 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |