Assay Details
Target Gene Details
Entrez Gene ID: | 10522 |
Gene Name: | DEAF1, transcription factor |
Gene Aliases: |
MRD24, NUDR, SPN, ZMYND5 |
Location: |
Chr.11:644220-695754 on Build GRCh38 |
Assay Gene Location: | Within Intron 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
DEAF1 | NM_001293634.1 | NP_001280563.1 | ||
NM_021008.3 | NP_066288.2 | |||
XM_011519842.2 | XP_011518144.1 | |||
AB209831.1 | BAD93068.1 | |||
AF007165.1 | AAB62704.1 | |||
AF049459.1 | AAC79676.1 | |||
AF049460.1 | AAC79677.1 | |||
AF068892.1 | AAC25714.1 | |||
AF068893.1 | AAC25715.1 | |||
AF068894.1 | AAC25716.1 | |||
AF068895.1 | AAC25717.1 | |||
AF068896.1 | AAC25718.1 | |||
AF068897.1 | AAC25719.1 | |||
AK289873.1 | ||||
AK291383.1 | ||||
BC053322.1 | AAH53322.1 | |||
FJ985253.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv469923 | Chr.11:378188 - 1302334 on Build GRCh38 | Loss | RPLP2 PNPLA2 LOC143666 TSPAN4 CD151 DEAF1 MIR6744 TALDO1 SLC25A22 MUC5B MIR210 PKP3 HRAS B4GALNT4 PTDSS2 CDHR5 DRD4 LOC101059906 LOC171391 LOC101927503 MUC6 PIDD1 LMNTD2 SNORA52 LRRC56 MUC5AC RASSF7 TOLLIP PDDC1 TMEM80 PHRF1 MIR210HG AP2A2 PANO1 POLR2L CEND1 RNH1 MUC2 CHID1 SIGIRR CRACR2B IRF7 ANO9 EPS8L2 SCT |
dgv124e201 | Chr.11:664307 - 665458 on Build GRCh38 | Deletion | DEAF1 |
nsv832043 | Chr.11:631027 - 758602 on Build GRCh38 | Loss | DRD4 DEAF1 TALDO1 TMEM80 EPS8L2 |
esv2759794 | Chr.11:409846 - 1336162 on Build GRCh38 | Loss | RPLP2 PNPLA2 LOC143666 TSPAN4 CD151 DEAF1 MIR6744 TALDO1 SLC25A22 MUC5B MIR210 HRAS PTDSS2 CDHR5 DRD4 LOC101059906 LOC171391 LOC101927503 TOLLIP-AS1 MUC6 PIDD1 LMNTD2 SNORA52 LRRC56 MUC5AC RASSF7 TOLLIP PDDC1 TMEM80 PHRF1 MIR210HG AP2A2 PANO1 POLR2L CEND1 RNH1 MUC2 CHID1 SIGIRR CRACR2B IRF7 ANO9 EPS8L2 SCT |
nsv1039558 | Chr.11:534242 - 672091 on Build GRCh38 | Gain | LRRC56 LOC143666 RASSF7 DEAF1 PHRF1 MIR210HG MIR210 HRAS CDHR5 DRD4 IRF7 SCT LMNTD2 |
nsv1053964 | Chr.11:491334 - 692433 on Build GRCh38 | Gain | LRRC56 LOC143666 RASSF7 DEAF1 PHRF1 MIR210HG MIR210 HRAS RNH1 PTDSS2 CDHR5 DRD4 LOC101059906 IRF7 SCT LMNTD2 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | RPLP2 PNPLA2 LOC143666 TSPAN4 CD151 DEAF1 TALDO1 SLC25A22 MIR210 PKP3 HRAS B4GALNT4 PTDSS2 CDHR5 DRD4 LOC101059906 LOC171391 PIDD1 LMNTD2 SNORA52 LRRC56 RASSF7 PDDC1 TMEM80 PHRF1 MIR210HG AP2A2 PANO1 POLR2L CEND1 RNH1 CHID1 SIGIRR CRACR2B IRF7 ANO9 EPS8L2 SCT |
dgv1525n54 | Chr.11:647869 - 688312 on Build GRCh38 | Loss | DEAF1 |
nsv1159791 | Chr.11:461793 - 909492 on Build GRCh38 | Deletion | RPLP2 PNPLA2 LOC143666 TSPAN4 CD151 DEAF1 TALDO1 SLC25A22 MIR210 HRAS PTDSS2 CDHR5 DRD4 LOC101059906 LOC171391 PIDD1 LMNTD2 SNORA52 LRRC56 RASSF7 PDDC1 TMEM80 PHRF1 MIR210HG PANO1 POLR2L CEND1 RNH1 CHID1 CRACR2B IRF7 EPS8L2 SCT |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |