Assay Details
Target Gene Details
Entrez Gene ID: | 10522 |
Gene Name: | DEAF1, transcription factor |
Gene Aliases: |
MRD24, NUDR, SPN, ZMYND5 |
Location: |
Chr.11:644220-695754 on Build GRCh38 |
Assay Gene Location: | Within Intron 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
DEAF1 | NM_001293634.1 | NP_001280563.1 | ||
NM_021008.3 | NP_066288.2 | |||
XM_011519842.2 | XP_011518144.1 | |||
AB209831.1 | BAD93068.1 | |||
AF007165.1 | AAB62704.1 | |||
AF049459.1 | AAC79676.1 | |||
AF049460.1 | AAC79677.1 | |||
AF068892.1 | AAC25714.1 | |||
AF068893.1 | AAC25715.1 | |||
AF068894.1 | AAC25716.1 | |||
AF068895.1 | AAC25717.1 | |||
AF068896.1 | AAC25718.1 | |||
AF068897.1 | AAC25719.1 | |||
AK289873.1 | ||||
AK291383.1 | ||||
BC053322.1 | AAH53322.1 | |||
FJ985253.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv1522n54 | Chr.11:557342 - 656845 on Build GRCh38 | Loss | MIR210HG LOC143666 DRD4 SCT PHRF1 CDHR5 IRF7 RASSF7 DEAF1 MIR210 LMNTD2 |
nsv469923 | Chr.11:378188 - 1302334 on Build GRCh38 | Loss | LRRC56 LOC143666 LOC101059906 EPS8L2 SCT PTDSS2 CEND1 CDHR5 CD151 TMEM80 B4GALNT4 POLR2L MUC5AC PKP3 DRD4 CHID1 LOC171391 PHRF1 RNH1 SNORA52 IRF7 RPLP2 RASSF7 PANO1 LMNTD2 MUC6 MIR6744 ANO9 MUC2 CRACR2B MIR210HG PIDD1 MUC5B AP2A2 DEAF1 TOLLIP TALDO1 LOC101927503 PDDC1 HRAS SIGIRR TSPAN4 MIR210 SLC25A22 PNPLA2 |
nsv552861 | Chr.11:589246 - 662407 on Build GRCh38 | Loss | DRD4 SCT PHRF1 CDHR5 IRF7 DEAF1 |
nsv832043 | Chr.11:631027 - 758602 on Build GRCh38 | Loss | TALDO1 DRD4 EPS8L2 TMEM80 DEAF1 |
esv2759794 | Chr.11:409846 - 1336162 on Build GRCh38 | Loss | LRRC56 LOC143666 LOC101059906 EPS8L2 SCT PTDSS2 CEND1 CDHR5 CD151 TMEM80 POLR2L MUC5AC DRD4 CHID1 LOC171391 PHRF1 RNH1 SNORA52 IRF7 RPLP2 RASSF7 PANO1 LMNTD2 MUC6 MIR6744 ANO9 MUC2 CRACR2B MIR210HG PIDD1 MUC5B AP2A2 DEAF1 TOLLIP TALDO1 LOC101927503 TOLLIP-AS1 PDDC1 HRAS SIGIRR TSPAN4 MIR210 SLC25A22 PNPLA2 |
nsv1039558 | Chr.11:534242 - 672091 on Build GRCh38 | Gain | LRRC56 MIR210HG LOC143666 SCT CDHR5 DEAF1 DRD4 PHRF1 HRAS IRF7 RASSF7 MIR210 LMNTD2 |
nsv1053964 | Chr.11:491334 - 692433 on Build GRCh38 | Gain | LRRC56 MIR210HG LOC143666 LOC101059906 SCT PTDSS2 CDHR5 DEAF1 DRD4 PHRF1 HRAS RNH1 IRF7 RASSF7 MIR210 LMNTD2 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | LRRC56 LOC143666 LOC101059906 EPS8L2 SCT PTDSS2 CEND1 CDHR5 CD151 TMEM80 B4GALNT4 POLR2L PKP3 DRD4 CHID1 LOC171391 PHRF1 RNH1 SNORA52 IRF7 RPLP2 RASSF7 PANO1 LMNTD2 ANO9 CRACR2B MIR210HG PIDD1 AP2A2 DEAF1 TALDO1 PDDC1 HRAS SIGIRR TSPAN4 MIR210 SLC25A22 PNPLA2 |
dgv1525n54 | Chr.11:647869 - 688312 on Build GRCh38 | Loss | DEAF1 |
nsv1159791 | Chr.11:461793 - 909492 on Build GRCh38 | Deletion | LRRC56 LOC143666 LOC101059906 EPS8L2 SCT PTDSS2 CEND1 CDHR5 CD151 TMEM80 POLR2L DRD4 CHID1 LOC171391 PHRF1 RNH1 SNORA52 IRF7 RPLP2 RASSF7 PANO1 LMNTD2 CRACR2B MIR210HG PIDD1 DEAF1 TALDO1 PDDC1 HRAS TSPAN4 MIR210 SLC25A22 PNPLA2 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |