Assay Details
Target Gene Details
Entrez Gene ID: | 338707 |
Gene Name: | beta-1,4-N-acetyl-galactosaminyltransferase 4 |
Gene Aliases: |
- |
Location: |
Chr.11:369773-382117 on Build GRCh38 |
Assay Gene Location: | Within Exon 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
B4GALNT4 | NM_178537.4 | NP_848632.2 | ||
XM_017017654.1 | 1 | 731 | XP_016873143.1 | |
AB089939.1 | BAD06471.1 | |||
BC131528.1 | ||||
BF058197.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv527327 | Chr.11:295343 - 620599 on Build GRCh38 | Loss | IFITM1 MIR210HG ANO9 LOC101059906 IFITM5 IFITM2 MIR210 RNH1 HRAS PHRF1 PGGHG SIGIRR LRRC56 RASSF7 PKP3 IRF7 PTDSS2 IFITM3 CDHR5 LOC143666 B4GALNT4 LMNTD2 |
nsv552776 | Chr.11:366710 - 432436 on Build GRCh38 | Loss | ANO9 SIGIRR PKP3 B4GALNT4 |
esv28392 | Chr.11:363975 - 403432 on Build GRCh38 | Gain+Loss | PKP3 B4GALNT4 |
nsv951268 | Chr.11:368601 - 503700 on Build GRCh38 | Deletion | PTDSS2 ANO9 RNH1 SIGIRR PKP3 B4GALNT4 |
nsv552770 | Chr.11:356090 - 444628 on Build GRCh38 | Gain | ANO9 SIGIRR PKP3 B4GALNT4 |
dgv1505n54 | Chr.11:198510 - 470331 on Build GRCh38 | Gain | IFITM1 PSMD13 ANO9 IFITM5 RIC8A IFITM2 NLRP6 BET1L PGGHG SIGIRR SIRT3 PKP3 ODF3 PTDSS2 IFITM3 MIR6743 B4GALNT4 |
nsv825676 | Chr.11:366965 - 372662 on Build GRCh38 | Gain | B4GALNT4 |
nsv1159790 | Chr.11:340219 - 491334 on Build GRCh38 | Deletion | PTDSS2 ANO9 SIGIRR PKP3 B4GALNT4 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | SLC25A22 CHID1 MIR210HG LOC101059906 MIR210 RNH1 HRAS SNORA52 SIGIRR RASSF7 TALDO1 IRF7 LOC171391 TMEM80 CD151 PTDSS2 PDDC1 B4GALNT4 LMNTD2 ANO9 DRD4 AP2A2 PHRF1 TSPAN4 LRRC56 PIDD1 PKP3 RPLP2 EPS8L2 PNPLA2 POLR2L CRACR2B SCT PANO1 CDHR5 CEND1 LOC143666 DEAF1 |
dgv1507n54 | Chr.11:368778 - 382912 on Build GRCh38 | Loss | B4GALNT4 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |