Hs03716443_cn

• Gene Symbol: SAPCD2
• Assay Reference Genome Location: Chr.9:137068854 on build GRCh38
• Cytoband: 9q34.3

Target Gene Details

• Entrez Gene ID: 89958
• Gene Name: suppressor APC domain containing 2
• Gene Aliases: C9orf140, p42.3
• Location: Chr.9:137062127-137070576 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SAPCD2	NM_178448.3			NP_848543.2
	XM_011519180.2			XP_011517482.1
	BC048267.1			AAH48267.1
	BX332104.2
	DQ150361.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv13007n54	Chr.9:136966179 - 137173890 on Build GRCh38	Loss	PRR31 DPP7 MAN1B1-AS1 TMEM210 LCNL1 SAPCD2 GRIN1 LOC101930307 MIR3621 CLIC3 ABCA2 FUT7 C9orf139 C9orf142 LRRC26 PTGDS NPDC1 MAN1B1 UAP1L1 ENTPD2
nsv831761	Chr.9:137049674 - 137166473 on Build GRCh38	Loss	DPP7 MAN1B1-AS1 SAPCD2 GRIN1 LOC101930307 MAN1B1 UAP1L1 ENTPD2
nsv616006	Chr.9:137057859 - 137083633 on Build GRCh38	Loss	SAPCD2 UAP1L1
nsv524322	Chr.9:136795692 - 137482216 on Build GRCh38	Loss	CYSRT1 LCNL1 PHPT1 MIR7114 LOC101930307 MIR4479 MIR3621 LCN12 PNPLA7 TOR4A FUT7 NOXA1 C9orf139 NDOR1 C9orf142 C8G PTGDS CCDC183 UAP1L1 ENTPD2 NRARP PRR31 MAN1B1-AS1 TMEM203 EDF1 TMEM210 SAPCD2 FAM166A TPRN NSMF MIR4292 EXD3 C9orf172 LRRC26 RNF208 ENTPD8 ANAPC2 DPP7 CLIC3 SSNA1 STPG3 ABCA2 C9orf173-AS1 RABL6 GRIN1 NELFB TUBB4B SLC34A3 TRAF2 CCDC183-AS1 RNF224 MAMDC4 FBXW5 NPDC1 MAN1B1
nsv951206	Chr.9:136944849 - 137114548 on Build GRCh38	Deletion	PRR31 DPP7 MAN1B1-AS1 LCNL1 SAPCD2 LOC101930307 LCN12 CLIC3 ABCA2 FUT7 C9orf139 C9orf142 C8G PTGDS NPDC1 MAN1B1 UAP1L1 ENTPD2
nsv469918	Chr.9:136359865 - 137173890 on Build GRCh38	Loss	TMEM141 LCNL1 SDCCAG3 NOTCH1 PHPT1 LOC101930307 MIR4479 MIR3621 LCN12 FUT7 C9orf163 C9orf139 LCN8 C9orf142 C8G LCN15 PTGDS CCDC183 LCN10 UAP1L1 ENTPD2 PRR31 MAN1B1-AS1 EDF1 TMEM210 SAPCD2 MIR4292 SNHG7 PMPCA HSPC324 C9orf172 LRRC26 SNORA17A LINC01451 SNAPC4 FAM69B INPP5E DPP7 MIR4673 LOC100128593 MIR6722 LCN6 CLIC3 ABCA2 DNLZ AGPAT2 CARD9 SEC16A RABL6 NALT1 GRIN1 TRAF2 SNORA17B CCDC183-AS1 MIR4674 MAMDC4 FBXW5 EGFL7 NPDC1 MAN1B1 MIR126
nsv616005	Chr.9:137036493 - 137173890 on Build GRCh38	Loss	DPP7 MAN1B1-AS1 TMEM210 SAPCD2 GRIN1 LOC101930307 MIR3621 C9orf139 LRRC26 NPDC1 MAN1B1 UAP1L1 ENTPD2
esv2761561	Chr.9:137030185 - 137191593 on Build GRCh38	Gain	DPP7 MAN1B1-AS1 TMEM210 SAPCD2 GRIN1 LOC101930307 MIR3621 SSNA1 FUT7 C9orf139 LRRC26 ANAPC2 NPDC1 MAN1B1 UAP1L1 ENTPD2
esv2422220	Chr.9:136584135 - 137350098 on Build GRCh38	Deletion	TMEM141 CYSRT1 LCNL1 PHPT1 LOC101930307 MIR4479 MIR3621 LCN12 TOR4A FUT7 C9orf139 LCN8 NDOR1 C9orf142 C8G LCN15 PTGDS CCDC183 LCN10 UAP1L1 ENTPD2 NRARP PRR31 MAN1B1-AS1 TMEM203 EDF1 TMEM210 SAPCD2 FAM166A TPRN MIR4292 SNHG7 EXD3 HSPC324 C9orf172 LRRC26 SNORA17A LINC01451 RNF208 ANAPC2 FAM69B DPP7 LOC100128593 MIR6722 LCN6 CLIC3 SSNA1 STPG3 ABCA2 AGPAT2 C9orf173-AS1 RABL6 GRIN1 NELFB TUBB4B SLC34A3 TRAF2 SNORA17B CCDC183-AS1 RNF224 MAMDC4 FBXW5 EGFL7 NPDC1 MAN1B1 MIR126
nsv982354	Chr.9:137057355 - 137073859 on Build GRCh38	Duplication	SAPCD2

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation