Assay Details
Target Gene Details
Entrez Gene ID: | 10555 |
Gene Name: | 1-acylglycerol-3-phosphate O-acyltransferase 2 |
Gene Aliases: |
1-AGPAT2, BSCL, BSCL1, LPAAB, LPAAT-beta |
Location: |
Chr.9:136673143-136687459 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
AGPAT2 | NM_001012727.1 | NP_001012745.1 | ||
NM_006412.3 | NP_006403.2 | |||
AF000237.1 | AAC51649.1 | |||
AF011374.1 | AAB64299.1 | |||
BC000026.2 | AAH00026.1 | |||
BC004529.2 | AAH04529.1 | |||
BC019292.1 | AAH19292.1 | |||
BF347518.1 | ||||
CN407343.1 | ||||
U56418.2 | AAB58776.2 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv13005n54 | Chr.9:136605258 - 136696482 on Build GRCh38 | Loss | HSPC324 EGFL7 LINC01451 AGPAT2 MIR126 |
nsv509334 | Chr.9:136514168 - 136724663 on Build GRCh38 | Insertion | HSPC324 EGFL7 NOTCH1 SNHG7 LINC01451 FAM69B NALT1 MIR4674 AGPAT2 MIR4673 MIR126 |
nsv951203 | Chr.9:136562849 - 136770848 on Build GRCh38 | Deletion | MIR6722 SNORA17A EGFL7 SNORA17B LCN8 SNHG7 LCN10 LCN6 MIR126 HSPC324 LINC01451 FAM69B LOC100128593 AGPAT2 LCN15 |
nsv469918 | Chr.9:136359865 - 137173890 on Build GRCh38 | Loss | FUT7 PRR31 LINC01451 C9orf163 MIR4674 CCDC183-AS1 CARD9 LCN12 EGFL7 LCN8 SNHG7 CCDC183 LOC101930307 DPP7 LCN6 MAN1B1-AS1 FBXW5 MIR4479 ABCA2 HSPC324 TMEM141 TRAF2 MIR4292 EDF1 PTGDS SNORA17A MAN1B1 SNORA17B C9orf172 GRIN1 DNLZ CLIC3 LCNL1 MIR4673 ENTPD2 MAMDC4 C9orf139 FAM69B LOC100128593 SEC16A PHPT1 NALT1 AGPAT2 NPDC1 SNAPC4 UAP1L1 MIR6722 NOTCH1 LRRC26 LCN10 SAPCD2 C8G SDCCAG3 C9orf142 MIR3621 MIR126 TMEM210 INPP5E PMPCA RABL6 LCN15 |
esv2759720 | Chr.9:136356377 - 136932033 on Build GRCh38 | Loss | SNORA17A SNORA17B C9orf172 GPSM1 DNLZ MIR4673 MAMDC4 LINC01451 C9orf163 FAM69B LOC100128593 SEC16A PHPT1 NALT1 MIR4674 AGPAT2 CCDC183-AS1 CARD9 SNAPC4 MIR6722 EGFL7 LCN8 NOTCH1 SNHG7 CCDC183 LCN10 LCN6 MIR4479 SDCCAG3 MIR126 HSPC324 TMEM141 TRAF2 INPP5E PMPCA RABL6 LCN15 MIR4292 EDF1 |
nsv8579 | Chr.9:136505432 - 136760256 on Build GRCh38 | Gain | MIR6722 SNORA17A EGFL7 SNORA17B LCN8 NOTCH1 SNHG7 LCN10 LCN6 MIR4673 MIR126 HSPC324 LINC01451 FAM69B LOC100128593 NALT1 MIR4674 AGPAT2 LCN15 |
nsv1053781 | Chr.9:136590694 - 136722927 on Build GRCh38 | Gain | HSPC324 EGFL7 LINC01451 FAM69B AGPAT2 MIR126 |
dgv957n27 | Chr.9:136619086 - 136725859 on Build GRCh38 | Loss | HSPC324 EGFL7 SNHG7 FAM69B AGPAT2 MIR126 |
esv2422220 | Chr.9:136584135 - 137350098 on Build GRCh38 | Deletion | TUBB4B SLC34A3 FUT7 RNF224 PRR31 LINC01451 SSNA1 CCDC183-AS1 NDOR1 LCN12 EGFL7 LCN8 SNHG7 CCDC183 LOC101930307 DPP7 LCN6 MAN1B1-AS1 FBXW5 MIR4479 ABCA2 HSPC324 TMEM141 ANAPC2 TRAF2 C9orf173-AS1 MIR4292 EDF1 PTGDS SNORA17A MAN1B1 SNORA17B C9orf172 NELFB GRIN1 CLIC3 STPG3 LCNL1 TMEM203 ENTPD2 MAMDC4 C9orf139 TPRN FAM69B LOC100128593 PHPT1 AGPAT2 NPDC1 RNF208 UAP1L1 MIR6722 CYSRT1 EXD3 LRRC26 LCN10 SAPCD2 FAM166A C8G C9orf142 MIR3621 MIR126 NRARP TMEM210 RABL6 LCN15 TOR4A |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |