Assay Details
Target Gene Details
Entrez Gene ID: | 55326 |
Gene Name: | 1-acylglycerol-3-phosphate O-acyltransferase 5 |
Gene Aliases: |
1AGPAT5, LPAATE |
Location: |
Chr.8:6708357-6761503 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
AGPAT5 | NM_018361.3 | NP_060831.2 | ||
XM_011534751.2 | XP_011533053.1 | |||
AF375789.1 | AAK54809.1 | |||
AK002072.1 | BAA92069.1 | |||
AK310545.1 | ||||
AL136587.1 | CAB66522.1 | |||
BC023550.2 | AAH23550.1 | |||
BC068519.1 | AAH68519.1 | |||
BC080537.1 | AAH80537.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1021684 | Chr.8:6492570 - 6951933 on Build GRCh38 | Loss | AGPAT5 MCPH1 GS1-24F4.2 MIR4659A DEFA6 XKR5 MIR4659B MCPH1-AS1 DEFA4 MIR8055 ANGPT2 DEFA8P DEFB1 |
nsv610004 | Chr.8:6544845 - 6915391 on Build GRCh38 | Gain | AGPAT5 MIR8055 ANGPT2 MCPH1 DEFB1 GS1-24F4.2 MIR4659A XKR5 MIR4659B MCPH1-AS1 |
nsv1025976 | Chr.8:6615427 - 6829450 on Build GRCh38 | Loss | AGPAT5 MIR8055 MCPH1 MIR4659A XKR5 MIR4659B MCPH1-AS1 |
nsv6059 | Chr.8:6693878 - 6726740 on Build GRCh38 | Insertion | AGPAT5 MCPH1-AS1 |
esv2422383 | Chr.8:6504868 - 6924071 on Build GRCh38 | Duplication | AGPAT5 MIR8055 ANGPT2 MCPH1 DEFB1 GS1-24F4.2 MIR4659A XKR5 MIR4659B MCPH1-AS1 |
nsv831220 | Chr.8:6670324 - 6870969 on Build GRCh38 | Gain | AGPAT5 DEFB1 GS1-24F4.2 MIR4659A XKR5 MIR4659B MCPH1-AS1 |
nsv610006 | Chr.8:6710680 - 7063882 on Build GRCh38 | Gain | DEFA9P AGPAT5 DEFA10P DEFA1 DEFA3 GS1-24F4.2 DEFA7P MIR4659A DEFA6 XKR5 DEFT1P2 MIR4659B DEFA4 DEFT1P DEFA5 DEFA1B DEFA11P DEFA8P DEFB1 |
nsv1031577 | Chr.8:6712833 - 8008628 on Build GRCh38 | Gain | DEFA9P DEFB105A DEFA3 USP17L4 DEFT1P2 DEFB4B DEFA11P DEFB108P1 DEFB109P1B DEFB4A AGPAT5 DEFA10P DEFA1 DEFB103B MIR4659A DEFB105B MIR4659B SPAG11B DEFA4 DEFT1P OR7E125P DEFA8P LINC00965 DEFB107B FAM90A7P LOC101929400 DEFB106B FAM90A10P PRR23D1 DEFB106A ZNF705B DEFA7P DEFB104B DEFA5 DEFA1B DEFB1 USP17L8 LOC101928095 OR7E154P DEFB104A DEFB107A GS1-24F4.2 FAM66E DEFA6 XKR5 ZNF705G DEFB103A LOC107986910 SPAG11A USP17L1 FAM66B USP17L3 PRR23D2 |
dgv6876n100 | Chr.8:6687977 - 6812428 on Build GRCh38 | Loss | AGPAT5 MIR4659A XKR5 MIR4659B MCPH1-AS1 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |