Assay Details
Target Gene Details
Entrez Gene ID: | 84988 |
Gene Name: | protein phosphatase 1 regulatory subunit 16A |
Gene Aliases: |
MYPT3 |
Location: |
Chr.8:144477987-144502121 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PPP1R16A | XM_005272350.2 | XP_005272407.1 | ||
XM_017013912.1 | XP_016869401.1 | |||
XM_017013913.1 | XP_016869402.1 | |||
XM_017013914.1 | XP_016869403.1 | |||
XM_017013915.1 | XP_016869404.1 | |||
AK090471.1 | BAC03452.1 | |||
BM761618.1 | ||||
BM762557.1 | ||||
CN301973.1 | ||||
DB457525.1 | ||||
HY013777.1 | ||||
HY050499.1 | ||||
HY168641.1 | ||||
HY176205.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv907n27 | Chr.8:144416180 - 144525122 on Build GRCh38 | Loss | TONSL-AS1 SLC39A4 VPS28 PPP1R16A RECQL4 MFSD3 MIR6893 LRRC14 TONSL LOC101928953 CYHR1 FOXH1 GPT LRRC24 KIFC2 |
dgv12434n54 | Chr.8:144270080 - 144516801 on Build GRCh38 | Loss | SLC39A4 LOC101928902 VPS28 MIR6849 PPP1R16A FBXL6 RECQL4 TMEM249 DGAT1 MFSD3 SCRT1 LOC101928953 CPSF1 GPT SLC52A2 TONSL-AS1 MIR6848 MIR939 ADCK5 MIR6893 TONSL MIR1234 HSF1 CYHR1 FOXH1 BOP1 KIFC2 |
nsv470249 | Chr.8:143889098 - 144519234 on Build GRCh38 | Loss | SLC39A4 SMPD5 LOC101928902 VPS28 PLEC MIR6849 PPP1R16A FBXL6 RECQL4 OPLAH CYC1 TMEM249 DGAT1 MFSD3 PARP10 SPATC1 SCRT1 LRRC14 HGH1 SHARPIN LOC101928953 CPSF1 GPT MIR7112 SLC52A2 MIR6846 TONSL-AS1 MIR6848 GPAA1 GRINA MIR939 SCX ADCK5 WDR97 MIR6893 TONSL MAF1 MIR1234 MIR661 HSF1 CYHR1 FOXH1 BOP1 MROH1 EXOSC4 MIR6847 KIFC2 |
nsv612951 | Chr.8:144479830 - 144677692 on Build GRCh38 | Loss | MFSD3 LRRC14 PPP1R16A RECQL4 LOC101928953 C8orf82 ARHGAP39 GPT LRRC24 |
nsv831489 | Chr.8:144342140 - 144544026 on Build GRCh38 | Loss | SLC39A4 LOC101928902 VPS28 MIR6849 PPP1R16A FBXL6 RECQL4 C8orf82 ARHGAP39 TMEM249 MFSD3 LRRC14 LOC101928953 CPSF1 GPT SLC52A2 TONSL-AS1 MIR939 ADCK5 MIR6893 TONSL MIR1234 CYHR1 FOXH1 LRRC24 KIFC2 |
nsv515809 | Chr.8:143904439 - 144519234 on Build GRCh38 | Gain+Loss | SLC39A4 SMPD5 LOC101928902 VPS28 PLEC MIR6849 PPP1R16A FBXL6 RECQL4 OPLAH CYC1 TMEM249 DGAT1 MFSD3 PARP10 SPATC1 SCRT1 LRRC14 HGH1 SHARPIN LOC101928953 CPSF1 GPT MIR7112 SLC52A2 MIR6846 TONSL-AS1 MIR6848 GPAA1 GRINA MIR939 SCX ADCK5 WDR97 MIR6893 TONSL MAF1 MIR1234 MIR661 HSF1 CYHR1 FOXH1 BOP1 MROH1 EXOSC4 MIR6847 KIFC2 |
dgv12439n54 | Chr.8:144438306 - 144525122 on Build GRCh38 | Loss | TONSL-AS1 MFSD3 LRRC14 TONSL PPP1R16A RECQL4 LOC101928953 CYHR1 FOXH1 GPT LRRC24 KIFC2 |
nsv612940 | Chr.8:144436292 - 144613673 on Build GRCh38 | Loss | TONSL-AS1 PPP1R16A RECQL4 C8orf82 ARHGAP39 MFSD3 LRRC14 TONSL LOC101928953 CYHR1 FOXH1 GPT LRRC24 KIFC2 |
nsv428208 | Chr.8:144041826 - 144722291 on Build GRCh38 | Gain | SLC39A4 SMPD5 LOC101928902 VPS28 MIR6849 PPP1R16A FBXL6 RECQL4 OPLAH C8orf82 CYC1 ARHGAP39 TMEM249 DGAT1 MFSD3 SPATC1 SCRT1 LRRC14 HGH1 SHARPIN LOC101928953 CPSF1 GPT MIR7112 SLC52A2 MIR6846 TONSL-AS1 MIR6848 GPAA1 MIR939 SCX ADCK5 WDR97 ZNF251 MIR6893 TONSL MAF1 MIR1234 HSF1 CYHR1 FOXH1 BOP1 MROH1 EXOSC4 MIR6847 LRRC24 KIFC2 |
esv29999 | Chr.8:144456732 - 144525122 on Build GRCh38 | Loss | MFSD3 LRRC14 PPP1R16A RECQL4 LOC101928953 CYHR1 FOXH1 GPT LRRC24 KIFC2 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |