Assay Details
Target Gene Details
Entrez Gene ID: | 55326 |
Gene Name: | 1-acylglycerol-3-phosphate O-acyltransferase 5 |
Gene Aliases: |
1AGPAT5, LPAATE |
Location: |
Chr.8:6708357-6761503 on Build GRCh38 |
Assay Gene Location: | Within Intron 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
AGPAT5 | NM_018361.3 | NP_060831.2 | ||
XM_011534751.2 | XP_011533053.1 | |||
AF375789.1 | AAK54809.1 | |||
AK002072.1 | BAA92069.1 | |||
AK310545.1 | ||||
AL136587.1 | CAB66522.1 | |||
BC023550.2 | AAH23550.1 | |||
BC068519.1 | AAH68519.1 | |||
BC080537.1 | AAH80537.1 |
Target Gene Details
Entrez Gene ID: | 100616348 |
Gene Name: | microRNA 4659a |
Gene Aliases: |
mir-4659a |
Location: |
Chr.8:6745164-6745244 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
MIR4659A | NR_039803.1 |
Target Gene Details
Entrez Gene ID: | 100616372 |
Gene Name: | microRNA 4659b |
Gene Aliases: |
- |
Location: |
Chr.8:6745168-6745240 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
MIR4659B | NR_039807.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1021684 | Chr.8:6492570 - 6951933 on Build GRCh38 | Loss | AGPAT5 DEFA4 DEFB1 XKR5 DEFA8P MCPH1 MCPH1-AS1 DEFA6 MIR4659B ANGPT2 MIR4659A MIR8055 GS1-24F4.2 |
nsv610004 | Chr.8:6544845 - 6915391 on Build GRCh38 | Gain | MCPH1-AS1 AGPAT5 MIR4659B ANGPT2 DEFB1 MIR4659A XKR5 MCPH1 MIR8055 GS1-24F4.2 |
nsv1025976 | Chr.8:6615427 - 6829450 on Build GRCh38 | Loss | MCPH1-AS1 AGPAT5 MIR4659B MIR4659A XKR5 MCPH1 MIR8055 |
esv2422383 | Chr.8:6504868 - 6924071 on Build GRCh38 | Duplication | MCPH1-AS1 AGPAT5 MIR4659B ANGPT2 DEFB1 MIR4659A XKR5 MCPH1 MIR8055 GS1-24F4.2 |
nsv831220 | Chr.8:6670324 - 6870969 on Build GRCh38 | Gain | MCPH1-AS1 AGPAT5 MIR4659B DEFB1 MIR4659A XKR5 GS1-24F4.2 |
nsv610006 | Chr.8:6710680 - 7063882 on Build GRCh38 | Gain | AGPAT5 DEFA1B DEFA9P DEFA4 DEFA10P DEFB1 XKR5 DEFA8P DEFA1 DEFA5 DEFA6 MIR4659B DEFA7P DEFA3 MIR4659A DEFA11P DEFT1P GS1-24F4.2 DEFT1P2 |
nsv1031577 | Chr.8:6712833 - 8008628 on Build GRCh38 | Gain | AGPAT5 DEFB1 DEFB4A XKR5 DEFB103A ZNF705B DEFA1 USP17L4 DEFA7P DEFB107B DEFB106A DEFB4B USP17L1 DEFT1P2 DEFB104B USP17L3 FAM90A10P DEFA9P DEFA4 DEFA10P PRR23D1 SPAG11A FAM66B DEFB106B DEFA6 DEFB104A DEFB103B DEFA3 USP17L8 DEFA11P DEFT1P GS1-24F4.2 SPAG11B DEFA8P OR7E125P PRR23D2 LOC101928095 DEFA5 MIR4659A FAM66E OR7E154P LOC107986910 DEFB107A DEFA1B FAM90A7P LINC00965 MIR4659B LOC101929400 DEFB109P1B DEFB105B ZNF705G DEFB105A DEFB108P1 |
dgv6876n100 | Chr.8:6687977 - 6812428 on Build GRCh38 | Loss | MCPH1-AS1 AGPAT5 MIR4659B MIR4659A XKR5 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |