Assay Details
Target Gene Details
Entrez Gene ID: | 55326 |
Gene Name: | 1-acylglycerol-3-phosphate O-acyltransferase 5 |
Gene Aliases: |
1AGPAT5, LPAATE |
Location: |
Chr.8:6708357-6761503 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
AGPAT5 | NM_018361.3 | NP_060831.2 | ||
XM_011534751.2 | XP_011533053.1 | |||
AF375789.1 | AAK54809.1 | |||
AK002072.1 | BAA92069.1 | |||
AK310545.1 | ||||
AL136587.1 | CAB66522.1 | |||
BC023550.2 | AAH23550.1 | |||
BC068519.1 | AAH68519.1 | |||
BC080537.1 | AAH80537.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1021684 | Chr.8:6492570 - 6951933 on Build GRCh38 | Loss | MCPH1-AS1 MCPH1 DEFA6 MIR4659A AGPAT5 ANGPT2 XKR5 GS1-24F4.2 DEFA8P DEFB1 MIR8055 MIR4659B DEFA4 |
nsv610004 | Chr.8:6544845 - 6915391 on Build GRCh38 | Gain | AGPAT5 ANGPT2 MCPH1-AS1 MCPH1 XKR5 GS1-24F4.2 DEFB1 MIR8055 MIR4659B MIR4659A |
nsv1025976 | Chr.8:6615427 - 6829450 on Build GRCh38 | Loss | AGPAT5 MCPH1-AS1 MCPH1 XKR5 MIR8055 MIR4659B MIR4659A |
nsv6059 | Chr.8:6693878 - 6726740 on Build GRCh38 | Insertion | AGPAT5 MCPH1-AS1 |
esv2422383 | Chr.8:6504868 - 6924071 on Build GRCh38 | Duplication | AGPAT5 ANGPT2 MCPH1-AS1 MCPH1 XKR5 GS1-24F4.2 DEFB1 MIR8055 MIR4659B MIR4659A |
nsv831220 | Chr.8:6670324 - 6870969 on Build GRCh38 | Gain | AGPAT5 MCPH1-AS1 XKR5 GS1-24F4.2 DEFB1 MIR4659B MIR4659A |
nsv610006 | Chr.8:6710680 - 7063882 on Build GRCh38 | Gain | DEFA6 DEFA9P MIR4659A AGPAT5 DEFA7P DEFA3 DEFA1B XKR5 DEFT1P2 GS1-24F4.2 DEFT1P DEFA11P DEFA8P DEFA5 DEFA10P DEFB1 MIR4659B DEFA4 DEFA1 |
nsv1031577 | Chr.8:6712833 - 8008628 on Build GRCh38 | Gain | LOC101929400 LOC101928095 DEFB4B FAM66B ZNF705G DEFA6 FAM90A10P ZNF705B DEFT1P DEFB103B DEFA4 DEFB103A PRR23D2 OR7E154P MIR4659A DEFB106A DEFA7P DEFB4A DEFA1B USP17L8 DEFT1P2 GS1-24F4.2 DEFA8P MIR4659B DEFB105A FAM66E SPAG11A LOC107986910 USP17L1 DEFB107A DEFB107B DEFA5 DEFA10P DEFB1 USP17L3 OR7E125P LINC00965 DEFB105B DEFB104B DEFB108P1 USP17L4 DEFB106B DEFA9P PRR23D1 FAM90A7P AGPAT5 DEFA3 DEFB104A XKR5 SPAG11B DEFA11P DEFB109P1B DEFA1 |
dgv6876n100 | Chr.8:6687977 - 6812428 on Build GRCh38 | Loss | AGPAT5 MCPH1-AS1 XKR5 MIR4659B MIR4659A |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |