Assay Details
Target Gene Details
Entrez Gene ID: | 55326 |
Gene Name: | 1-acylglycerol-3-phosphate O-acyltransferase 5 |
Gene Aliases: |
1AGPAT5, LPAATE |
Location: |
Chr.8:6708357-6761503 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
AGPAT5 | NM_018361.3 | NP_060831.2 | ||
XM_011534751.2 | XP_011533053.1 | |||
AF375789.1 | AAK54809.1 | |||
AK002072.1 | BAA92069.1 | |||
AK310545.1 | ||||
AL136587.1 | CAB66522.1 | |||
BC023550.2 | AAH23550.1 | |||
BC068519.1 | AAH68519.1 | |||
BC080537.1 | AAH80537.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1021684 | Chr.8:6492570 - 6951933 on Build GRCh38 | Loss | DEFB1 MCPH1 DEFA4 MCPH1-AS1 GS1-24F4.2 MIR8055 XKR5 AGPAT5 DEFA6 MIR4659A MIR4659B ANGPT2 DEFA8P |
nsv610004 | Chr.8:6544845 - 6915391 on Build GRCh38 | Gain | AGPAT5 DEFB1 MCPH1 MIR4659A MIR4659B MCPH1-AS1 ANGPT2 GS1-24F4.2 MIR8055 XKR5 |
nsv1025976 | Chr.8:6615427 - 6829450 on Build GRCh38 | Loss | AGPAT5 MCPH1 MIR4659A MIR4659B MCPH1-AS1 MIR8055 XKR5 |
nsv6059 | Chr.8:6693878 - 6726740 on Build GRCh38 | Insertion | AGPAT5 MCPH1-AS1 |
esv2422383 | Chr.8:6504868 - 6924071 on Build GRCh38 | Duplication | AGPAT5 DEFB1 MCPH1 MIR4659A MIR4659B MCPH1-AS1 ANGPT2 GS1-24F4.2 MIR8055 XKR5 |
nsv831220 | Chr.8:6670324 - 6870969 on Build GRCh38 | Gain | AGPAT5 DEFB1 MIR4659A MIR4659B MCPH1-AS1 GS1-24F4.2 XKR5 |
nsv610006 | Chr.8:6710680 - 7063882 on Build GRCh38 | Gain | DEFA1B DEFA9P DEFA7P DEFB1 DEFA3 DEFA4 DEFT1P2 GS1-24F4.2 XKR5 AGPAT5 DEFA6 DEFA11P DEFT1P MIR4659A MIR4659B DEFA5 DEFA8P DEFA1 DEFA10P |
nsv1031577 | Chr.8:6712833 - 8008628 on Build GRCh38 | Gain | DEFA1B DEFA9P DEFA7P OR7E154P DEFA3 DEFT1P2 DEFB106B DEFB106A DEFA6 DEFB103A DEFA11P DEFT1P MIR4659A PRR23D1 MIR4659B LOC101929400 OR7E125P LINC00965 DEFA8P USP17L8 DEFA1 DEFA10P USP17L1 ZNF705B FAM90A7P LOC101928095 XKR5 AGPAT5 DEFB104A SPAG11B FAM66E USP17L3 DEFB1 DEFB107A ZNF705G DEFB108P1 DEFB104B LOC107986910 DEFA4 DEFB109P1B GS1-24F4.2 DEFB103B USP17L4 DEFB4A SPAG11A DEFB105B DEFB105A DEFB4B FAM90A10P PRR23D2 DEFB107B DEFA5 FAM66B |
dgv6876n100 | Chr.8:6687977 - 6812428 on Build GRCh38 | Loss | AGPAT5 MIR4659A MIR4659B MCPH1-AS1 XKR5 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |