Assay Details
Target Gene Details
Entrez Gene ID: | 84988 |
Gene Name: | protein phosphatase 1 regulatory subunit 16A |
Gene Aliases: |
MYPT3 |
Location: |
Chr.8:144477987-144502121 on Build GRCh38 |
Assay Gene Location: | Within Intron 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PPP1R16A | XM_005272350.2 | XP_005272407.1 | ||
XM_017013912.1 | XP_016869401.1 | |||
XM_017013913.1 | XP_016869402.1 | |||
XM_017013914.1 | XP_016869403.1 | |||
XM_017013915.1 | XP_016869404.1 | |||
AK090471.1 | BAC03452.1 | |||
BM761618.1 | ||||
BM762557.1 | ||||
CN301973.1 | ||||
DB457525.1 | ||||
HY013777.1 | ||||
HY050499.1 | ||||
HY168641.1 | ||||
HY176205.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv907n27 | Chr.8:144416180 - 144525122 on Build GRCh38 | Loss | VPS28 TONSL LOC101928953 LRRC24 MIR6893 CYHR1 SLC39A4 LRRC14 TONSL-AS1 KIFC2 PPP1R16A MFSD3 GPT FOXH1 RECQL4 |
dgv12434n54 | Chr.8:144270080 - 144516801 on Build GRCh38 | Loss | VPS28 SCRT1 LOC101928953 CPSF1 MIR6893 CYHR1 HSF1 KIFC2 TMEM249 PPP1R16A DGAT1 MIR6849 FBXL6 GPT FOXH1 TONSL LOC101928902 SLC52A2 SLC39A4 MIR6848 MIR939 ADCK5 TONSL-AS1 BOP1 MFSD3 MIR1234 RECQL4 |
nsv470249 | Chr.8:143889098 - 144519234 on Build GRCh38 | Loss | VPS28 MIR6847 SCRT1 LOC101928953 CPSF1 SPATC1 MIR6893 MROH1 MIR7112 CYHR1 SCX HSF1 GRINA KIFC2 TMEM249 PPP1R16A DGAT1 MIR6849 FBXL6 GPT HGH1 FOXH1 PLEC MAF1 OPLAH MIR6846 TONSL WDR97 SHARPIN LOC101928902 SLC52A2 SLC39A4 MIR6848 PARP10 SMPD5 MIR939 ADCK5 LRRC14 TONSL-AS1 BOP1 EXOSC4 MFSD3 MIR1234 CYC1 MIR661 RECQL4 GPAA1 |
nsv612951 | Chr.8:144479830 - 144677692 on Build GRCh38 | Loss | C8orf82 PPP1R16A LOC101928953 MFSD3 LRRC24 GPT ARHGAP39 RECQL4 LRRC14 |
nsv831489 | Chr.8:144342140 - 144544026 on Build GRCh38 | Loss | VPS28 LOC101928953 CPSF1 MIR6893 CYHR1 KIFC2 TMEM249 PPP1R16A MIR6849 FBXL6 GPT ARHGAP39 FOXH1 C8orf82 TONSL LRRC24 LOC101928902 SLC52A2 SLC39A4 MIR939 ADCK5 LRRC14 TONSL-AS1 MFSD3 MIR1234 RECQL4 |
nsv515809 | Chr.8:143904439 - 144519234 on Build GRCh38 | Gain+Loss | VPS28 MIR6847 SCRT1 LOC101928953 CPSF1 SPATC1 MIR6893 MROH1 MIR7112 CYHR1 SCX HSF1 GRINA KIFC2 TMEM249 PPP1R16A DGAT1 MIR6849 FBXL6 GPT HGH1 FOXH1 PLEC MAF1 OPLAH MIR6846 TONSL WDR97 SHARPIN LOC101928902 SLC52A2 SLC39A4 MIR6848 PARP10 SMPD5 MIR939 ADCK5 LRRC14 TONSL-AS1 BOP1 EXOSC4 MFSD3 MIR1234 CYC1 MIR661 RECQL4 GPAA1 |
dgv12439n54 | Chr.8:144438306 - 144525122 on Build GRCh38 | Loss | TONSL-AS1 KIFC2 TONSL PPP1R16A LOC101928953 MFSD3 LRRC24 GPT CYHR1 FOXH1 RECQL4 LRRC14 |
nsv612940 | Chr.8:144436292 - 144613673 on Build GRCh38 | Loss | C8orf82 TONSL LOC101928953 LRRC24 CYHR1 LRRC14 TONSL-AS1 KIFC2 PPP1R16A MFSD3 GPT ARHGAP39 FOXH1 RECQL4 |
nsv428208 | Chr.8:144041826 - 144722291 on Build GRCh38 | Gain | VPS28 MIR6847 SCRT1 LOC101928953 CPSF1 SPATC1 MIR6893 MROH1 MIR7112 CYHR1 SCX ZNF251 HSF1 KIFC2 TMEM249 PPP1R16A DGAT1 MIR6849 FBXL6 GPT ARHGAP39 HGH1 FOXH1 MAF1 OPLAH MIR6846 C8orf82 TONSL WDR97 LRRC24 SHARPIN LOC101928902 SLC52A2 SLC39A4 MIR6848 SMPD5 MIR939 ADCK5 LRRC14 TONSL-AS1 BOP1 EXOSC4 MFSD3 MIR1234 CYC1 RECQL4 GPAA1 |
esv29999 | Chr.8:144456732 - 144525122 on Build GRCh38 | Loss | KIFC2 PPP1R16A LOC101928953 MFSD3 LRRC24 GPT CYHR1 FOXH1 RECQL4 LRRC14 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |