Assay Details
Target Gene Details
Entrez Gene ID: | 84988 |
Gene Name: | protein phosphatase 1 regulatory subunit 16A |
Gene Aliases: |
MYPT3 |
Location: |
Chr.8:144477987-144502121 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PPP1R16A | XM_005272350.2 | XP_005272407.1 | ||
XM_017013912.1 | XP_016869401.1 | |||
XM_017013913.1 | XP_016869402.1 | |||
XM_017013914.1 | XP_016869403.1 | |||
XM_017013915.1 | XP_016869404.1 | |||
AK090471.1 | BAC03452.1 | |||
BM761618.1 | ||||
BM762557.1 | ||||
CN301973.1 | ||||
DB457525.1 | ||||
HY013777.1 | ||||
HY050499.1 | ||||
HY168641.1 | ||||
HY176205.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv907n27 | Chr.8:144416180 - 144525122 on Build GRCh38 | Loss | CYHR1 GPT FOXH1 PPP1R16A MFSD3 TONSL-AS1 MIR6893 LRRC24 TONSL VPS28 LRRC14 RECQL4 KIFC2 SLC39A4 LOC101928953 |
dgv12434n54 | Chr.8:144270080 - 144516801 on Build GRCh38 | Loss | CYHR1 GPT MIR939 BOP1 CPSF1 TONSL MIR6848 LOC101928902 SCRT1 SLC39A4 TMEM249 FOXH1 PPP1R16A MFSD3 FBXL6 TONSL-AS1 ADCK5 MIR6893 HSF1 VPS28 MIR6849 SLC52A2 RECQL4 KIFC2 DGAT1 MIR1234 LOC101928953 |
nsv470249 | Chr.8:143889098 - 144519234 on Build GRCh38 | Loss | CYHR1 GPT MIR939 SCX GRINA MIR6846 BOP1 CPSF1 MIR7112 TONSL OPLAH GPAA1 PLEC MIR6848 LOC101928902 MIR661 SCRT1 MAF1 SLC39A4 WDR97 SPATC1 SHARPIN TMEM249 FOXH1 PPP1R16A MFSD3 FBXL6 TONSL-AS1 ADCK5 MIR6893 HSF1 EXOSC4 VPS28 LRRC14 MIR6849 MROH1 SLC52A2 RECQL4 KIFC2 PARP10 SMPD5 HGH1 DGAT1 CYC1 MIR1234 MIR6847 LOC101928953 |
nsv831489 | Chr.8:144342140 - 144544026 on Build GRCh38 | Loss | ARHGAP39 CYHR1 GPT MIR939 CPSF1 TONSL LOC101928902 SLC39A4 TMEM249 C8orf82 FOXH1 PPP1R16A MFSD3 FBXL6 TONSL-AS1 ADCK5 MIR6893 LRRC24 VPS28 LRRC14 MIR6849 SLC52A2 RECQL4 KIFC2 MIR1234 LOC101928953 |
nsv515809 | Chr.8:143904439 - 144519234 on Build GRCh38 | Gain+Loss | CYHR1 GPT MIR939 SCX GRINA MIR6846 BOP1 CPSF1 MIR7112 TONSL OPLAH GPAA1 PLEC MIR6848 LOC101928902 MIR661 SCRT1 MAF1 SLC39A4 WDR97 SPATC1 SHARPIN TMEM249 FOXH1 PPP1R16A MFSD3 FBXL6 TONSL-AS1 ADCK5 MIR6893 HSF1 EXOSC4 VPS28 LRRC14 MIR6849 MROH1 SLC52A2 RECQL4 KIFC2 PARP10 SMPD5 HGH1 DGAT1 CYC1 MIR1234 MIR6847 LOC101928953 |
dgv12439n54 | Chr.8:144438306 - 144525122 on Build GRCh38 | Loss | CYHR1 GPT LRRC14 RECQL4 FOXH1 KIFC2 PPP1R16A MFSD3 TONSL-AS1 LRRC24 TONSL LOC101928953 |
nsv612940 | Chr.8:144436292 - 144613673 on Build GRCh38 | Loss | ARHGAP39 CYHR1 GPT C8orf82 FOXH1 PPP1R16A MFSD3 TONSL-AS1 LRRC24 TONSL LRRC14 RECQL4 KIFC2 LOC101928953 |
nsv428208 | Chr.8:144041826 - 144722291 on Build GRCh38 | Gain | ARHGAP39 CYHR1 GPT MIR939 SCX MIR6846 BOP1 CPSF1 MIR7112 TONSL OPLAH GPAA1 MIR6848 LOC101928902 ZNF251 SCRT1 MAF1 SLC39A4 WDR97 SPATC1 SHARPIN TMEM249 C8orf82 FOXH1 PPP1R16A MFSD3 FBXL6 TONSL-AS1 ADCK5 MIR6893 LRRC24 HSF1 EXOSC4 VPS28 LRRC14 MIR6849 MROH1 SLC52A2 RECQL4 KIFC2 SMPD5 HGH1 DGAT1 CYC1 MIR1234 MIR6847 LOC101928953 |
esv29999 | Chr.8:144456732 - 144525122 on Build GRCh38 | Loss | CYHR1 GPT LRRC14 RECQL4 FOXH1 KIFC2 PPP1R16A MFSD3 LRRC24 LOC101928953 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |