Assay Details
Target Gene Details
Entrez Gene ID: | 100532737 |
Gene Name: | ATP6V1G2-DDX39B readthrough (NMD candidate) |
Gene Aliases: |
- |
Location: |
Chr.6:31530219-31546848 on Build GRCh38 |
Assay Gene Location: | Within Intron 8 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
ATP6V1G2-DDX39B | NR_037853.1 |
Target Gene Details
Entrez Gene ID: | 7919 |
Gene Name: | DEAD-box helicase 39B |
Gene Aliases: |
BAT1, D6S81E, UAP56 |
Location: |
Chr.6:31530219-31542475 on Build GRCh38 |
Assay Gene Location: | Within Intron 6 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
DDX39B | NM_004640.6 | NP_004631.1 | ||
NM_080598.5 | NP_542165.1 | |||
NR_037852.1 | ||||
AK127767.1 | 5 | 3705 | ||
AK222912.1 | BAD96632.1 | |||
AK298194.1 | ||||
BC000361.2 | AAH00361.1 | |||
BC013006.2 | AAH13006.1 | |||
BT009909.1 | AAP88911.1 | |||
Z37166.1 | CAA85523.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2759414 | Chr.6:31060513 - 31574531 on Build GRCh38 | Gain+Loss |
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nsv1126749 | Chr.6:31457323 - 32594423 on Build GRCh38 | Deletion |
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nsv1073969 | Chr.6:31456422 - 33480523 on Build GRCh38 | Deletion |
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dgv10403n54 | Chr.6:31312324 - 32049763 on Build GRCh38 | Loss |
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nsv1112900 | Chr.6:31455323 - 33480423 on Build GRCh38 | Deletion |
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nsv470809 | Chr.6:31529138 - 31576412 on Build GRCh38 | Loss |
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dgv10404n54 | Chr.6:31312550 - 32516591 on Build GRCh38 | Loss |
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nsv830627 | Chr.6:31528437 - 31692173 on Build GRCh38 | Loss |
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More Information
Additional Information:
For this assay, SNP(s) [rs114910910] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
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Gene Ontology Categories:
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