Assay Details
Target Gene Details
Entrez Gene ID: | 5987 |
Gene Name: | tripartite motif containing 27 |
Gene Aliases: |
RFP, RNF76 |
Location: |
Chr.6:28903002-28923991 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TRIM27 | NM_006510.4 | NP_006501.1 | ||
AB209885.1 | BAD93122.1 | |||
AF230393.1 | AAG50172.1 | |||
AF230394.1 | AAG50173.1 | |||
AJ420519.1 | ||||
AX776009.1 | CAE11704.1 | |||
AX776011.1 | CAE11705.1 | |||
BC013580.1 | AAH13580.1 | |||
BC066924.1 | AAH66924.1 | |||
J03407.1 | AAA36564.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1145096 | Chr.6:28626523 - 29718723 on Build GRCh38 | Deletion | OR14J1 OR2B3 MAS1L OR2J2 LINC00533 HCG16 LOC101929006 UBD LOC100129636 OR2W1 ZNF311 OR10C1 ZFP57 LINC01556 OR2H2 LINC01015 GABBR1 MOG OR11A1 HCG14 LINC01623 OR12D3 TRIM27 OR2H1 OR2J3 OR5V1 OR12D2 SNORD32B |
nsv1074388 | Chr.6:28510222 - 29115423 on Build GRCh38 | Deletion | OR2B3 GPX6 LINC01556 ZBED9 HCG14 LINC01623 TRIM27 LINC00533 HCG16 LOC100129636 OR2J3 OR2W1 GPX5 ZNF311 |
nsv1122126 | Chr.6:28628023 - 31244023 on Build GRCh38 | Deletion | RPP21 TRIM39 TRIM40 RNF39 MIR4640 HCG20 LINC00533 PSORS1C3 LOC101929006 VARS2 UBD HCG18 TRIM31-AS1 GTF2H4 ATAT1 LOC554223 LINC00243 MRPS18B ZNF311 ABCF1 DDR1 IER3 TRIM10 HCG17 ZFP57 LINC01556 OR2H2 TRIM31 MDC1 OR11A1 LINC01623 PSORS1C2 DHX16 IFITM4P HLA-H CDSN FLOT1 C6orf136 OR2H1 MDC1-AS1 PSORS1C1 OR2J3 ZNRD1 HCG4B OR12D2 TUBB PPP1R18 SNORD32B TRIM15 OR14J1 OR2B3 HCG27 ZNRD1ASP MAS1L TCF19 NRM OR2J2 CCHCR1 HCG16 TRIM39-RPP21 SFTA2 HLA-J MIR877 LOC100129636 HCG4 HLA-F HLA-L OR2W1 PPP1R10 LOC105375014 MUC21 PPP1R11 PRR3 HLA-G GNL1 OR10C1 HLA-E LINC01015 GABBR1 MOG DPCR1 HLA-K HCG14 POU5F1 OR12D3 TRIM27 HCG22 MUC22 TRIM26 OR5V1 HCG9 HLA-A HCG8 HLA-F-AS1 C6orf15 |
nsv830622 | Chr.6:28893890 - 29048027 on Build GRCh38 | Gain | TRIM27 HCG16 LINC01556 LOC100129636 OR2W1 HCG14 ZNF311 |
nsv601212 | Chr.6:28865448 - 28926150 on Build GRCh38 | Gain | TRIM27 HCG14 |
nsv5238 | Chr.6:28901583 - 28936124 on Build GRCh38 | Insertion | TRIM27 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |