Hs03586062_cn

• Gene Symbol: LINC00336
• Assay Reference Genome Location: Chr.6:33589717 on build GRCh38
• Cytoband: 6p21.31

Target Gene Details

• Entrez Gene ID: 401253
• Gene Name: long intergenic non-protein coding RNA 336
• Gene Aliases: C6orf227, NCRNA00336
• Location: Chr.6:33586106-33593338 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LINC00336	NR_027908.1
	AK125740.1			BAC86269.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3608630	Chr.6:33439052 - 34076935 on Build GRCh38	Gain	IP6K3 MIR7159 MLN GGNBP1 LEMD2 BAK1 LINC01016 SYNGAP1 LOC105375026 GRM4 ZBTB9 LOC101929188 MIR1275 LINC00336 UQCC2 MIR3934 ITPR3
dgv85n68	Chr.6:33583425 - 33743569 on Build GRCh38	Loss	IP6K3 LOC101929188 GGNBP1 LINC00336 UQCC2 MIR3934 ITPR3
nsv602833	Chr.6:33567103 - 33620370 on Build GRCh38	Loss	GGNBP1 LINC00336 BAK1

More Information

Additional Information:

For this assay, SNP(s) [rs111357030] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation