Assay Details
Target Gene Details
Entrez Gene ID: | 100506658 |
Gene Name: | occludin |
Gene Aliases: |
BLCPMG, PPP1R115 |
Location: |
Chr.5:69492292-69558104 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
OCLN | NM_001205254.1 | NP_001192183.1 | ||
NM_002538.3 | NP_002529.1 | |||
XM_017008913.1 | XP_016864402.1 | |||
XM_017008914.1 | XP_016864403.1 | |||
AK290697.1 | ||||
AK313501.1 | ||||
BC029886.1 | AAH29886.1 | |||
DB226845.1 | ||||
U49184.1 | AAC50451.1 | |||
U53823.1 | AAB00195.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3570182 | Chr.5:69457781 - 69533508 on Build GRCh38 | Loss | LOC101928924 OCLN |
nsv1034024 | Chr.5:69464444 - 69822296 on Build GRCh38 | Gain | GTF2H2C GUSBP3 LOC728488 LOC101928924 OCLN |
nsv821643 | Chr.5:69272838 - 71076658 on Build GRCh38 | Loss | LOC101929599 LOC441081 LOC653080 SERF1A LOC101928924 CCDC125 LOC647859 GUSBP3 RAD17 SMN2 NAIP GTF2H2C LOC728488 MARVELD2 OCLN LOC728526 AK6 TAF9 SERF1B SMN1 LOC107986354 GTF2H2 GTF2H2B SMA5 CDK7 LOC107986351 SMA4 |
nsv1023116 | Chr.5:69448480 - 69571455 on Build GRCh38 | Gain | GTF2H2C LOC101928924 OCLN |
nsv428117 | Chr.5:69347454 - 71500057 on Build GRCh38 | Gain+Loss | LOC101929599 LOC441081 LOC107986352 LOC653080 SERF1A LOC101928924 LOC647859 LOC102724392 GUSBP3 RAD17 SMN2 NAIP LOC107986353 GTF2H2C BDP1 LOC728488 MARVELD2 OCLN LOC728526 AK6 TAF9 SERF1B SMN1 PMCHL2 LOC107986354 GTF2H2 GTF2H2B GUSBP9 SMA5 LOC107986351 SMA4 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |