Assay Details
Target Gene Details
Entrez Gene ID: | 8878 |
Gene Name: | sequestosome 1 |
Gene Aliases: |
A170, FTDALS3, OSIL, PDB3, ZIP3, p60, p62, p62B |
Location: |
Chr.5:179806388-179838078 on Build GRCh38 |
Assay Gene Location: | Within Exon 6 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SQSTM1 | NM_001142298.1 | NP_001135770.1 | ||
NM_001142299.1 | NP_001135771.1 | |||
NM_003900.4 | NP_003891.1 | |||
XM_017010010.1 | 1 | 380 | XP_016865499.1 | |
AK025146.1 | ||||
AK226167.1 | ||||
AK293509.1 | ||||
AK304877.1 | ||||
AK312451.1 | ||||
BC001874.1 | AAH01874.1 | |||
BC003139.1 | AAH03139.1 | |||
BC017222.1 | AAH17222.1 | |||
BC019111.1 | AAH19111.1 | |||
BI549805.1 | ||||
DA541885.1 | ||||
DC398116.1 | ||||
U41806.1 | AAA93299.1 | |||
U46751.1 | AAC52070.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv469579 | Chr.5:179757830 - 179933191 on Build GRCh38 | Loss | MAML1 LTC4S LOC100996419 TBC1D9B RNF130 MGAT4B MIR1229 SQSTM1 C5orf45 |
nsv823361 | Chr.5:179786323 - 179824243 on Build GRCh38 | Loss | LTC4S MGAT4B MIR1229 SQSTM1 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |