Assay Details
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv4n111 | Chr.1:869076 - 914637 on Build GRCh38 | Duplication | LOC284600 FAM41C |
nsv1004962 | Chr.1:629241 - 915295 on Build GRCh38 | Gain | OR4F16 LOC100133331 LOC100288069 MTND1P23 MTND2P28 LOC100287934 MIR6723 LINC01128 LINC00115 LOC284600 FAM41C LOC107984841 FAM87B |
nsv482937 | Chr.1:10001 - 2368561 on Build GRCh38 | Loss | PERM1 VWA1 AURKAIP1 CCNL2 MIR6727 SSU72 MIR6859-1 TMEM88B LOC100134822 WASH7P KLHL17 CDK11B ATAD3B TNFRSF4 MORN1 RNF223 MIR6808 ANKRD65 DDX11L1 CDK11A LOC100132287 LOC107985729 LOC100130417 UBE2J2 PLEKHN1 TTLL10-AS1 LOC729737 MIB2 SDF4 FAM138A MIR200A TNFRSF18 NOC2L ISG15 MTND2P28 ATAD3A LOC100287934 LOC102725121 LOC102724312 LOC107984841 OR4F16 LOC105378592 GNB1 MIR429 LINC01342 FNDC10 SLC35E2B OR4F5 CPTP MRPL20 LOC105378948 LOC105378949 SKI CFAP74 OR4F29 LOC100506504 MIR1302-2 B3GALT6 MTND1P23 GABRD LOC105378947 LOC107985728 FAM132A TAS1R3 LOC284600 SCNN1D FAM87B PUSL1 MIR6859-2 LOC105378591 MXRA8 LOC105378589 LOC100288175 CPSF3L AGRN MIR6723 SAMD11 C1orf159 ATAD3C LOC100129534 FAM41C MMP23B FAAP20 DVL1 NADK CALML6 TTLL10 HES4 MMP23A MIR6726 LOC101928626 LINC00115 LOC148413 LOC100133331 TMEM52 LOC100288069 ACAP3 TMEM240 SLC35E2 LINC01128 MIR200B PRKCZ |
nsv950451 | Chr.1:899421 - 1094520 on Build GRCh38 | Deletion | PERM1 RNF223 KLHL17 LOC100288175 HES4 NOC2L ISG15 AGRN LOC100130417 LOC107985728 LOC105378948 PLEKHN1 SAMD11 C1orf159 LOC284600 |
nsv509035 | Chr.1:891406 - 985724 on Build GRCh38 | Insertion | PERM1 LOC100130417 LOC107985728 PLEKHN1 KLHL17 SAMD11 LOC284600 NOC2L |
dgv1n67 | Chr.1:811028 - 914557 on Build GRCh38 | Gain | LINC01128 LINC00115 LOC284600 FAM41C FAM87B |
nsv1005935 | Chr.1:805477 - 915295 on Build GRCh38 | Gain | LINC01128 LINC00115 LOC284600 FAM41C FAM87B |
esv3584982 | Chr.1:837710 - 917284 on Build GRCh38 | Gain | LOC100130417 LINC01128 LOC284600 FAM41C |
nsv1009537 | Chr.1:841742 - 915295 on Build GRCh38 | Gain | LINC01128 LOC284600 FAM41C |
nsv428334 | Chr.1:874371 - 1220569 on Build GRCh38 | Gain | PERM1 SDF4 KLHL17 MIR200A TTLL10 TNFRSF18 HES4 NOC2L ISG15 LOC107985728 TNFRSF4 LOC284600 RNF223 LOC100288175 MIR429 AGRN LINC01342 LOC100130417 LOC105378948 PLEKHN1 TTLL10-AS1 SAMD11 C1orf159 MIR200B FAM41C |
nsv10161 | Chr.1:776731 - 1777210 on Build GRCh38 | Gain+Loss | PERM1 VWA1 AURKAIP1 CCNL2 MIR6727 SSU72 TMEM88B B3GALT6 KLHL17 CDK11B LOC107985728 ATAD3B FAM132A TAS1R3 TNFRSF4 LOC284600 SCNN1D FAM87B RNF223 PUSL1 MIR6808 ANKRD65 CDK11A MXRA8 LOC100288175 CPSF3L AGRN LOC107985729 LOC100130417 UBE2J2 PLEKHN1 TTLL10-AS1 SAMD11 C1orf159 ATAD3C FAM41C MMP23B DVL1 MIB2 SDF4 NADK MIR200A TTLL10 TNFRSF18 HES4 NOC2L ISG15 MMP23A MIR6726 ATAD3A LOC100287934 LINC00115 LOC102724312 LOC148413 LOC100288069 ACAP3 MIR429 TMEM240 LINC01342 SLC35E2 FNDC10 SLC35E2B CPTP MRPL20 LOC105378948 LINC01128 MIR200B |
dgv5n100 | Chr.1:585989 - 1114424 on Build GRCh38 | Gain | PERM1 MTND1P23 KLHL17 LOC105378947 HES4 NOC2L ISG15 MTND2P28 LOC100287934 LOC101928626 LOC107985728 LINC00115 LOC284600 LOC107984841 FAM87B OR4F16 RNF223 LOC100133331 LOC100288069 LOC100288175 AGRN LOC100130417 MIR6723 LOC105378948 LINC01128 PLEKHN1 SAMD11 C1orf159 FAM41C |
nsv517709 | Chr.1:817186 - 1275912 on Build GRCh38 | Gain+Loss | PERM1 SDF4 B3GALT6 KLHL17 MIR200A TTLL10 TNFRSF18 HES4 NOC2L ISG15 LOC107985728 FAM132A LINC00115 TNFRSF4 LOC284600 FAM87B RNF223 LOC100288175 MIR429 AGRN LINC01342 LOC100130417 UBE2J2 LOC105378948 LINC01128 PLEKHN1 TTLL10-AS1 SAMD11 C1orf159 MIR200B FAM41C |
dgv1n111 | Chr.1:690090 - 939522 on Build GRCh38 | Duplication | OR4F16 LOC100133331 LOC100288069 LOC100287934 LOC100130417 LOC107985728 LINC01128 SAMD11 LINC00115 LOC284600 FAM41C LOC107984841 FAM87B |
dgv3n111 | Chr.1:783283 - 939522 on Build GRCh38 | Duplication | LOC100287934 LOC100130417 LOC107985728 LINC01128 SAMD11 LINC00115 LOC284600 FAM41C FAM87B |
dgv2n67 | Chr.1:877618 - 1426500 on Build GRCh38 | Gain | PERM1 AURKAIP1 CCNL2 MIR6727 DVL1 SDF4 TMEM88B B3GALT6 KLHL17 MIR200A TTLL10 TNFRSF18 HES4 NOC2L ISG15 MIR6726 LOC107985728 FAM132A TAS1R3 TNFRSF4 LOC284600 SCNN1D LOC148413 RNF223 PUSL1 MIR6808 ANKRD65 MXRA8 LOC100288175 CPSF3L ACAP3 MIR429 AGRN LINC01342 LOC100130417 UBE2J2 CPTP MRPL20 LOC105378948 PLEKHN1 TTLL10-AS1 SAMD11 C1orf159 MIR200B |
nsv832980 | Chr.1:848279 - 1007037 on Build GRCh38 | Gain | PERM1 LOC100130417 LOC107985728 LINC01128 PLEKHN1 KLHL17 SAMD11 LOC284600 HES4 FAM41C NOC2L |
esv2762129 | Chr.1:771719 - 901705 on Build GRCh38 | Gain | LOC100287934 LOC100288069 LINC01128 LINC00115 FAM41C FAM87B |
esv3584976 | Chr.1:733250 - 914824 on Build GRCh38 | Gain | LOC100287934 LOC100288069 LINC01128 LINC00115 LOC284600 FAM41C LOC107984841 FAM87B |