Assay Details
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv4n111 | Chr.1:869076 - 914637 on Build GRCh38 | Duplication | LOC284600 FAM41C |
nsv1004962 | Chr.1:629241 - 915295 on Build GRCh38 | Gain | LOC100133331 LOC100288069 OR4F16 FAM41C LINC01128 MTND2P28 MIR6723 FAM87B LOC284600 MTND1P23 LOC107984841 LINC00115 LOC100287934 |
nsv482937 | Chr.1:10001 - 2368561 on Build GRCh38 | Loss | TNFRSF18 AGRN SLC35E2B MIR6723 LOC729737 SDF4 OR4F29 TTLL10 PERM1 LOC100288069 CDK11B LOC105378947 PUSL1 DDX11L1 FAAP20 CCNL2 LOC284600 RNF223 UBE2J2 TNFRSF4 MORN1 ISG15 LOC105378949 SKI WASH7P AURKAIP1 FAM41C LINC01128 TAS1R3 LOC102724312 MIR200A LINC00115 GNB1 LOC100133331 CFAP74 MIB2 SCNN1D TTLL10-AS1 DVL1 MIR6859-1 MIR200B LOC105378592 KLHL17 LOC100129534 ANKRD65 MXRA8 LOC105378589 ATAD3A MIR429 LOC100134822 LOC107985729 MMP23A B3GALT6 TMEM88B ATAD3B CPSF3L LINC01342 LOC105378948 FNDC10 MIR1302-2 LOC102725121 LOC105378591 MIR6808 FAM138A ATAD3C HES4 NADK NOC2L MIR6726 MTND1P23 LOC107984841 LOC100130417 MIR6859-2 LOC100287934 OR4F16 TMEM52 TMEM240 LOC100506504 MRPL20 C1orf159 SLC35E2 CALML6 ACAP3 FAM87B GABRD LOC100288175 MIR6727 VWA1 PRKCZ LOC107985728 MMP23B SSU72 CDK11A PLEKHN1 MTND2P28 OR4F5 FAM132A SAMD11 LOC101928626 LOC100132287 CPTP LOC148413 |
nsv950451 | Chr.1:899421 - 1094520 on Build GRCh38 | Deletion | LOC105378948 PERM1 AGRN LOC107985728 PLEKHN1 C1orf159 HES4 LOC284600 SAMD11 RNF223 KLHL17 LOC100288175 NOC2L ISG15 LOC100130417 |
nsv509035 | Chr.1:891406 - 985724 on Build GRCh38 | Insertion | PERM1 LOC284600 SAMD11 KLHL17 NOC2L LOC107985728 LOC100130417 PLEKHN1 |
dgv1n67 | Chr.1:811028 - 914557 on Build GRCh38 | Gain | FAM87B LOC284600 FAM41C LINC01128 LINC00115 |
nsv1005935 | Chr.1:805477 - 915295 on Build GRCh38 | Gain | FAM87B LOC284600 FAM41C LINC01128 LINC00115 |
esv3584982 | Chr.1:837710 - 917284 on Build GRCh38 | Gain | LOC284600 FAM41C LINC01128 LOC100130417 |
nsv1009537 | Chr.1:841742 - 915295 on Build GRCh38 | Gain | LOC284600 FAM41C LINC01128 |
nsv428334 | Chr.1:874371 - 1220569 on Build GRCh38 | Gain | MIR429 TNFRSF18 AGRN FAM41C C1orf159 LOC100288175 MIR200A SDF4 LINC01342 TTLL10 LOC105378948 PERM1 LOC107985728 TTLL10-AS1 PLEKHN1 MIR200B HES4 LOC284600 SAMD11 RNF223 KLHL17 TNFRSF4 NOC2L ISG15 LOC100130417 |
nsv10161 | Chr.1:776731 - 1777210 on Build GRCh38 | Gain+Loss | MIR429 TNFRSF18 AGRN SLC35E2B LOC107985729 MMP23A B3GALT6 TMEM88B ATAD3B CPSF3L SDF4 LINC01342 TTLL10 LOC105378948 PERM1 LOC100288069 FNDC10 CDK11B PUSL1 MIR6808 ATAD3C HES4 CCNL2 NADK LOC284600 RNF223 UBE2J2 TNFRSF4 NOC2L ISG15 MIR6726 LOC100130417 LOC100287934 AURKAIP1 FAM41C LINC01128 TMEM240 TAS1R3 LOC102724312 MRPL20 C1orf159 SLC35E2 ACAP3 FAM87B LOC100288175 MIR6727 MIR200A LINC00115 VWA1 LOC107985728 MIB2 MMP23B SSU72 SCNN1D TTLL10-AS1 CDK11A PLEKHN1 DVL1 MIR200B FAM132A SAMD11 KLHL17 ANKRD65 MXRA8 CPTP ATAD3A LOC148413 |
dgv5n100 | Chr.1:585989 - 1114424 on Build GRCh38 | Gain | AGRN OR4F16 FAM41C LINC01128 C1orf159 MIR6723 FAM87B LOC100288175 LINC00115 LOC105378948 LOC100133331 PERM1 LOC100288069 LOC105378947 LOC107985728 PLEKHN1 MTND2P28 HES4 LOC284600 SAMD11 RNF223 KLHL17 NOC2L ISG15 MTND1P23 LOC107984841 LOC101928626 LOC100130417 LOC100287934 |
nsv517709 | Chr.1:817186 - 1275912 on Build GRCh38 | Gain+Loss | MIR429 TNFRSF18 AGRN FAM41C LINC01128 C1orf159 FAM87B LOC100288175 B3GALT6 MIR200A LINC00115 SDF4 LINC01342 TTLL10 LOC105378948 PERM1 LOC107985728 TTLL10-AS1 PLEKHN1 MIR200B HES4 FAM132A LOC284600 SAMD11 RNF223 KLHL17 UBE2J2 TNFRSF4 NOC2L ISG15 LOC100130417 |
dgv1n111 | Chr.1:690090 - 939522 on Build GRCh38 | Duplication | LOC100133331 LOC100288069 OR4F16 FAM41C LINC01128 LOC107985728 FAM87B LOC284600 SAMD11 LOC107984841 LOC100130417 LINC00115 LOC100287934 |
dgv3n111 | Chr.1:783283 - 939522 on Build GRCh38 | Duplication | FAM87B LOC284600 SAMD11 FAM41C LINC01128 LOC107985728 LOC100130417 LINC00115 LOC100287934 |
dgv2n67 | Chr.1:877618 - 1426500 on Build GRCh38 | Gain | MIR429 TNFRSF18 AGRN AURKAIP1 TAS1R3 MRPL20 C1orf159 ACAP3 LOC100288175 B3GALT6 MIR6727 TMEM88B MIR200A CPSF3L SDF4 LINC01342 TTLL10 LOC105378948 PERM1 PUSL1 LOC107985728 SCNN1D TTLL10-AS1 PLEKHN1 MIR6808 DVL1 MIR200B HES4 CCNL2 FAM132A LOC284600 SAMD11 RNF223 KLHL17 UBE2J2 TNFRSF4 ANKRD65 MXRA8 NOC2L ISG15 MIR6726 LOC100130417 CPTP LOC148413 |
nsv832980 | Chr.1:848279 - 1007037 on Build GRCh38 | Gain | PERM1 LOC284600 SAMD11 KLHL17 FAM41C NOC2L LINC01128 LOC107985728 LOC100130417 PLEKHN1 HES4 |
esv2762129 | Chr.1:771719 - 901705 on Build GRCh38 | Gain | FAM87B LOC100288069 FAM41C LINC01128 LINC00115 LOC100287934 |
esv3584976 | Chr.1:733250 - 914824 on Build GRCh38 | Gain | FAM87B LOC284600 LOC100288069 FAM41C LINC01128 LOC107984841 LINC00115 LOC100287934 |