Assay Details
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv4n111 | Chr.1:869076 - 914637 on Build GRCh38 | Duplication | FAM41C LOC284600 |
nsv1004962 | Chr.1:629241 - 915295 on Build GRCh38 | Gain | LOC100287934 MTND2P28 LOC100133331 FAM41C MIR6723 MTND1P23 LINC00115 OR4F16 LOC107984841 LOC100288069 FAM87B LOC284600 LINC01128 |
nsv482937 | Chr.1:10001 - 2368561 on Build GRCh38 | Loss | LOC148413 ISG15 MMP23A LOC102725121 TNFRSF18 AGRN OR4F5 DVL1 MIR1302-2 SDF4 GABRD OR4F29 ATAD3C LOC105378592 SCNN1D MRPL20 PUSL1 MIB2 KLHL17 LOC107985728 LOC100130417 FAM132A SLC35E2B CDK11A CALML6 LOC100133331 LOC105378949 MIR6726 GNB1 MXRA8 LINC01128 PERM1 TTLL10-AS1 LOC100129534 MIR429 FNDC10 CPTP SKI HES4 PLEKHN1 RNF223 CDK11B CPSF3L MIR6727 SSU72 MIR6859-2 TNFRSF4 B3GALT6 LOC107985729 OR4F16 LOC105378591 FAM138A MORN1 LOC105378589 ACAP3 TAS1R3 LOC100132287 MMP23B VWA1 AURKAIP1 ATAD3B SAMD11 LOC101928626 ATAD3A MIR200A FAM41C MTND1P23 LOC105378948 LOC729737 FAM87B MIR200B TMEM52 DDX11L1 LOC105378947 SLC35E2 PRKCZ MIR6859-1 MIR6808 MIR6723 WASH7P LINC00115 TMEM240 LOC102724312 TMEM88B CCNL2 C1orf159 LINC01342 TTLL10 LOC100287934 MTND2P28 NOC2L LOC100506504 LOC100288175 CFAP74 FAAP20 NADK ANKRD65 LOC107984841 LOC100288069 UBE2J2 LOC284600 LOC100134822 |
nsv950451 | Chr.1:899421 - 1094520 on Build GRCh38 | Deletion | C1orf159 ISG15 SAMD11 HES4 NOC2L PLEKHN1 RNF223 LOC100288175 AGRN LOC105378948 KLHL17 LOC284600 PERM1 LOC107985728 LOC100130417 |
nsv509035 | Chr.1:891406 - 985724 on Build GRCh38 | Insertion | KLHL17 LOC284600 SAMD11 PERM1 NOC2L LOC107985728 LOC100130417 PLEKHN1 |
dgv1n67 | Chr.1:811028 - 914557 on Build GRCh38 | Gain | FAM41C LINC00115 FAM87B LOC284600 LINC01128 |
nsv1005935 | Chr.1:805477 - 915295 on Build GRCh38 | Gain | FAM41C LINC00115 FAM87B LOC284600 LINC01128 |
esv3584982 | Chr.1:837710 - 917284 on Build GRCh38 | Gain | FAM41C LOC284600 LINC01128 LOC100130417 |
nsv1009537 | Chr.1:841742 - 915295 on Build GRCh38 | Gain | FAM41C LOC284600 LINC01128 |
nsv428334 | Chr.1:874371 - 1220569 on Build GRCh38 | Gain | TNFRSF4 ISG15 TNFRSF18 AGRN PERM1 TTLL10-AS1 MIR429 C1orf159 LINC01342 SDF4 TTLL10 SAMD11 HES4 NOC2L PLEKHN1 MIR200A RNF223 LOC100288175 FAM41C LOC105378948 KLHL17 LOC284600 MIR200B LOC107985728 LOC100130417 |
nsv10161 | Chr.1:776731 - 1777210 on Build GRCh38 | Gain+Loss | MIR6727 SSU72 LOC148413 TNFRSF4 B3GALT6 ISG15 MMP23A TNFRSF18 LOC107985729 AGRN ACAP3 TAS1R3 DVL1 SDF4 MMP23B ATAD3C VWA1 AURKAIP1 ATAD3B SAMD11 ATAD3A MIR200A SCNN1D FAM41C MRPL20 PUSL1 LOC105378948 MIB2 FAM87B KLHL17 MIR200B LOC107985728 LOC100130417 FAM132A SLC35E2B SLC35E2 MIR6808 CDK11A LINC00115 MIR6726 TMEM240 MXRA8 LOC102724312 LINC01128 PERM1 TTLL10-AS1 TMEM88B MIR429 CCNL2 C1orf159 LINC01342 TTLL10 LOC100287934 FNDC10 CPTP HES4 NOC2L PLEKHN1 RNF223 LOC100288175 NADK ANKRD65 CDK11B LOC100288069 UBE2J2 LOC284600 CPSF3L |
dgv5n100 | Chr.1:585989 - 1114424 on Build GRCh38 | Gain | LOC105378947 ISG15 LOC100133331 MIR6723 AGRN LINC00115 OR4F16 LINC01128 PERM1 C1orf159 LOC100287934 MTND2P28 SAMD11 HES4 NOC2L LOC101928626 PLEKHN1 RNF223 LOC100288175 FAM41C MTND1P23 LOC105378948 LOC107984841 LOC100288069 FAM87B KLHL17 LOC284600 LOC107985728 LOC100130417 |
nsv517709 | Chr.1:817186 - 1275912 on Build GRCh38 | Gain+Loss | FAM132A TNFRSF4 B3GALT6 ISG15 TNFRSF18 AGRN LINC00115 LINC01128 PERM1 TTLL10-AS1 MIR429 C1orf159 LINC01342 SDF4 TTLL10 SAMD11 HES4 NOC2L PLEKHN1 MIR200A RNF223 LOC100288175 FAM41C LOC105378948 UBE2J2 FAM87B KLHL17 LOC284600 MIR200B LOC107985728 LOC100130417 |
dgv1n111 | Chr.1:690090 - 939522 on Build GRCh38 | Duplication | LOC100287934 SAMD11 LOC100133331 FAM41C LINC00115 OR4F16 LOC107984841 LOC100288069 FAM87B LOC284600 LINC01128 LOC107985728 LOC100130417 |
dgv3n111 | Chr.1:783283 - 939522 on Build GRCh38 | Duplication | FAM41C LINC00115 LOC100287934 FAM87B LOC284600 LINC01128 SAMD11 LOC107985728 LOC100130417 |
dgv2n67 | Chr.1:877618 - 1426500 on Build GRCh38 | Gain | MIR6727 FAM132A LOC148413 TNFRSF4 MIR6808 B3GALT6 ISG15 TNFRSF18 AGRN MIR6726 MXRA8 PERM1 TTLL10-AS1 TMEM88B ACAP3 TAS1R3 DVL1 MIR429 CCNL2 C1orf159 LINC01342 SDF4 TTLL10 CPTP AURKAIP1 SAMD11 HES4 NOC2L PLEKHN1 MIR200A SCNN1D RNF223 LOC100288175 MRPL20 PUSL1 ANKRD65 LOC105378948 UBE2J2 KLHL17 LOC284600 CPSF3L MIR200B LOC107985728 LOC100130417 |
nsv832980 | Chr.1:848279 - 1007037 on Build GRCh38 | Gain | FAM41C KLHL17 LOC284600 LINC01128 SAMD11 PERM1 HES4 NOC2L LOC107985728 LOC100130417 PLEKHN1 |
esv3584976 | Chr.1:733250 - 914824 on Build GRCh38 | Gain | FAM41C LINC00115 LOC100287934 LOC107984841 LOC100288069 FAM87B LOC284600 LINC01128 |