Assay Details
Target Gene Details
Entrez Gene ID: | 54715 |
Gene Name: | RNA binding protein, fox-1 homolog 1 |
Gene Aliases: |
2BP1, A2BP1, FOX-1, FOX1, HRNBP1 |
Location: |
Chr.16:5239749-7713343 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
RBFOX1 | XM_017023319.1 | XP_016878808.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1723 | Chr.16:5322712 - 5339004 on Build GRCh38 | Insertion | RBFOX1 |
nsv1035156 | Chr.16:5091032 - 5996934 on Build GRCh38 | Gain | LINC01570 EEF2KMT RBFOX1 MIR8065 |
nsv1046986 | Chr.16:4049000 - 5555721 on Build GRCh38 | Gain | GLIS2-AS1 LINC01569 GLIS2 SEPT12 ANKS3 TFAP4 NAGPA-AS1 NMRAL1 C16orf89 UBALD1 MGRN1 ZNF500 CDIP1 PPL NAGPA DNAJA3 SEC14L5 ADCY9 EEF2KMT VASN ROGDI PAM16 MIR6769A SRL SMIM22 CORO7 RBFOX1 C16orf96 HMOX2 CORO7-PAM16 GLYR1 NUDT16L1 LOC105371063 C16orf71 ALG1 UBN1 |
nsv1052903 | Chr.16:5328428 - 5387609 on Build GRCh38 | Loss | RBFOX1 |
nsv1036241 | Chr.16:5271882 - 5387609 on Build GRCh38 | Loss | RBFOX1 |
esv3892764 | Chr.16:5316436 - 5404485 on Build GRCh38 | Loss | RBFOX1 |
esv2760069 | Chr.16:4922849 - 5374828 on Build GRCh38 | Gain+Loss | SEC14L5 EEF2KMT RBFOX1 NAGPA-AS1 C16orf89 ALG1 PPL NAGPA |
nsv428318 | Chr.16:5011594 - 5374828 on Build GRCh38 | Gain | SEC14L5 EEF2KMT RBFOX1 NAGPA-AS1 C16orf89 ALG1 NAGPA |
esv2762021 | Chr.16:5293419 - 5377238 on Build GRCh38 | Loss | RBFOX1 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |