Assay Details
Target Gene Details
Entrez Gene ID: | 54715 |
Gene Name: | RNA binding protein, fox-1 homolog 1 |
Gene Aliases: |
2BP1, A2BP1, FOX-1, FOX1, HRNBP1 |
Location: |
Chr.16:5239749-7713343 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
RBFOX1 | XM_017023319.1 | XP_016878808.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1723 | Chr.16:5322712 - 5339004 on Build GRCh38 | Insertion | RBFOX1 |
nsv1035156 | Chr.16:5091032 - 5996934 on Build GRCh38 | Gain | EEF2KMT MIR8065 LINC01570 RBFOX1 |
nsv1046986 | Chr.16:4049000 - 5555721 on Build GRCh38 | Gain | GLIS2-AS1 ADCY9 EEF2KMT SRL GLYR1 ZNF500 DNAJA3 TFAP4 LINC01569 LOC105371063 MGRN1 ALG1 NAGPA UBN1 VASN CORO7 C16orf96 C16orf71 UBALD1 RBFOX1 NAGPA-AS1 NMRAL1 CDIP1 CORO7-PAM16 C16orf89 HMOX2 NUDT16L1 ANKS3 SMIM22 PAM16 GLIS2 MIR6769A SEPT12 ROGDI SEC14L5 PPL |
nsv1045304 | Chr.16:5205761 - 5326875 on Build GRCh38 | Loss | RBFOX1 |
dgv2698n100 | Chr.16:5304641 - 5327717 on Build GRCh38 | Loss | RBFOX1 |
nsv1036241 | Chr.16:5271882 - 5387609 on Build GRCh38 | Loss | RBFOX1 |
esv3892764 | Chr.16:5316436 - 5404485 on Build GRCh38 | Loss | RBFOX1 |
esv2760069 | Chr.16:4922849 - 5374828 on Build GRCh38 | Gain+Loss | ALG1 NAGPA EEF2KMT RBFOX1 NAGPA-AS1 SEC14L5 PPL C16orf89 |
nsv428318 | Chr.16:5011594 - 5374828 on Build GRCh38 | Gain | ALG1 NAGPA EEF2KMT RBFOX1 NAGPA-AS1 SEC14L5 C16orf89 |
esv2762021 | Chr.16:5293419 - 5377238 on Build GRCh38 | Loss | RBFOX1 |
nsv1037303 | Chr.16:5287645 - 5327595 on Build GRCh38 | Loss | RBFOX1 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |