Assay Details
Target Gene Details
Entrez Gene ID: | 338707 |
Gene Name: | beta-1,4-N-acetyl-galactosaminyltransferase 4 |
Gene Aliases: |
- |
Location: |
Chr.11:369773-382117 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 10 - Exon 11 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
B4GALNT4 | NM_178537.4 | NP_848632.2 | ||
XM_017017654.1 | XP_016873143.1 | |||
AB089939.1 | BAD06471.1 | |||
BC131528.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv527327 | Chr.11:295343 - 620599 on Build GRCh38 | Loss | CDHR5 IRF7 ANO9 HRAS PTDSS2 RNH1 LMNTD2 MIR210 PHRF1 LOC101059906 SIGIRR IFITM1 LRRC56 B4GALNT4 IFITM3 PKP3 PGGHG RASSF7 LOC143666 IFITM2 MIR210HG IFITM5 |
nsv552776 | Chr.11:366710 - 432436 on Build GRCh38 | Loss | SIGIRR B4GALNT4 ANO9 PKP3 |
nsv1118197 | Chr.11:374500 - 377100 on Build GRCh38 | Deletion | B4GALNT4 |
esv28392 | Chr.11:363975 - 403432 on Build GRCh38 | Gain+Loss | B4GALNT4 PKP3 |
nsv951268 | Chr.11:368601 - 503700 on Build GRCh38 | Deletion | SIGIRR B4GALNT4 ANO9 PTDSS2 RNH1 PKP3 |
nsv552770 | Chr.11:356090 - 444628 on Build GRCh38 | Gain | SIGIRR B4GALNT4 ANO9 PKP3 |
dgv1505n54 | Chr.11:198510 - 470331 on Build GRCh38 | Gain | NLRP6 ANO9 PTDSS2 BET1L PSMD13 SIGIRR IFITM1 B4GALNT4 IFITM3 ODF3 PKP3 RIC8A SIRT3 PGGHG MIR6743 IFITM2 IFITM5 |
nsv1159790 | Chr.11:340219 - 491334 on Build GRCh38 | Deletion | SIGIRR B4GALNT4 ANO9 PTDSS2 PKP3 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | IRF7 POLR2L DEAF1 TALDO1 MIR210 CEND1 RPLP2 PHRF1 LOC101059906 PIDD1 CRACR2B LOC171391 AP2A2 PKP3 RASSF7 SCT MIR210HG CDHR5 SNORA52 CHID1 ANO9 HRAS PTDSS2 SLC25A22 TSPAN4 RNH1 LMNTD2 PANO1 CD151 DRD4 SIGIRR LRRC56 PNPLA2 B4GALNT4 EPS8L2 PDDC1 LOC143666 TMEM80 |
dgv1507n54 | Chr.11:368778 - 382912 on Build GRCh38 | Loss | B4GALNT4 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |