Assay Details
Target Gene Details
Entrez Gene ID: | 58191 |
Gene Name: | C-X-C motif chemokine ligand 16 |
Gene Aliases: |
CXCLG16, SR-PSOX, SRPSOX |
Location: |
Chr.17:4733529-4739928 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CXCL16 | NM_001100812.1 | 1 | 475 | NP_001094282.1 |
NM_022059.3 | 1 | 475 | NP_071342.2 | |
AF275260.1 | AAG31750.1 | |||
AF301016.1 | 1 | 366 | AAG34365.1 | |
AK027389.1 | 1 | 393 | BAB55078.1 | |
AK292114.1 | 1 | 317 | ||
AK315017.1 | 1 | 475 | ||
AY358909.1 | 1 | 320 | AAQ89268.1 | |
BC017588.1 | 1 | 469 | AAH17588.1 | |
BC044930.1 | 1 | 170 | AAH44930.1 | |
DC373874.1 | 1 | 475 | ||
JC209418.1 | 1 | 475 | ||
JC209420.1 | 1 | 475 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv574273 | Chr.17:4585589 - 5460332 on Build GRCh38 | Gain | LOC101928000 LOC101927979 GLTPD2 SPAG7 RABEP1 MIR6865 MIR6864 INCA1 TM4SF5 ZNF594 ARRB2 DHX33 GP1BA SMTNL2 MINK1 PLD2 LOC101559451 CAMTA2 RPAIN LOC100130950 RNF167 ZNF232 CXCL16 PFN1 MED11 PELP1 C1QBP LOC107984973 CHRNE PSMB6 ZMYND15 SLC25A11 SCIMP USP6 ENO3 ALOX15 SLC52A1 C17orf107 ZFP3 KIF1C NUP88 LOC102724009 VMO1 LOC400568 |
nsv833346 | Chr.17:4646256 - 4860871 on Build GRCh38 | Loss | PSMB6 ZMYND15 GLTPD2 TM4SF5 ARRB2 MINK1 PLD2 LOC101559451 CXCL16 VMO1 MED11 PELP1 LOC107984973 |
nsv1952 | Chr.17:4726245 - 4748889 on Build GRCh38 | Insertion | CXCL16 ZMYND15 MED11 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |