Assay Details
Target Gene Details
Entrez Gene ID: | 23600 |
Gene Name: | alpha-methylacyl-CoA racemase |
Gene Aliases: |
AMACRD, CBAS4, RACE, RM |
Location: |
Chr.5:33986986-34008115 on Build GRCh38 |
Assay Gene Location: | Within Exon 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
AMACR | NM_001167595.1 | 2 | 430 | NP_001161067.1 |
NM_014324.5 | 2 | 430 | NP_055139.4 | |
NM_203382.2 | 2 | 430 | NP_976316.1 | |
AF047020.1 | 2 | 422 | AAD10205.1 | |
AF158378.1 | 2 | 399 | AAF22610.1 | |
AJ130733.1 | 2 | 420 | CAB44062.1 | |
AK000912.1 | 2 | 415 | ||
AK022765.1 | 2 | 400 | ||
AK222831.1 | 2 | 402 | BAD96551.1 | |
AK225749.1 | 2 | 439 | ||
AK292988.1 | 2 | 380 | ||
AL545355.3 | 2 | 343 | ||
AY330488.1 | 2 | 343 | AAQ67234.1 | |
AY330489.1 | 2 | 343 | AAQ94259.1 | |
AY935981.1 | 2 | 343 | AAY16192.1 | |
BC009471.1 | 2 | 346 | AAH09471.1 | |
BG708726.1 | 2 | 366 | ||
BI550368.1 | 2 | 468 | ||
BT007193.1 | 2 | 334 | AAP35857.1 | |
DA156454.1 | 2 | 433 | ||
EF560721.1 | 2 | 353 | ||
FJ498906.1 | 2 | 346 | ||
FJ498907.1 | 2 | 346 | ||
FJ498908.1 | 2 | 346 |
Target Gene Details
Entrez Gene ID: | 100534612 |
Gene Name: | C1QTNF3-AMACR readthrough (NMD candidate) |
Gene Aliases: |
- |
Location: |
Chr.5:33986986-34124528 on Build GRCh38 |
Assay Gene Location: | Within Exon 7 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
C1QTNF3-AMACR | NR_037951.1 | 7 | 851 | |
AB209261.1 | 7 | 860 | BAD92498.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv830255 | Chr.5:33929507 - 34109160 on Build GRCh38 | Loss | SLC45A2 AMACR RXFP3 C1QTNF3-AMACR C1QTNF3 |
nsv519240 | Chr.5:33950598 - 34749311 on Build GRCh38 | Gain | LOC105374753 SLC45A2 AMACR LOC646652 RAI14 C1QTNF3-AMACR C1QTNF3 |
nsv522715 | Chr.5:33319157 - 34037875 on Build GRCh38 | Gain | SLC45A2 AMACR RXFP3 ADAMTS12 C1QTNF3-AMACR C1QTNF3 TARS |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |