Assay Details
Target Gene Details
Entrez Gene ID: | 56114 |
Gene Name: | protocadherin gamma subfamily A, 1 |
Gene Aliases: |
PCDH-GAMMA-A1 |
Location: |
Chr.5:141330685-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA1 | NM_018912.2 | NP_061735.1 | ||
AF152318.1 | AAD43712.1 |
Target Gene Details
Entrez Gene ID: | 56113 |
Gene Name: | protocadherin gamma subfamily A, 2 |
Gene Aliases: |
PCDH-GAMMA-A2 |
Location: |
Chr.5:141338760-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA2 | NM_018915.3 | NP_061738.1 | ||
AF152322.1 | AAD43716.1 |
Target Gene Details
Entrez Gene ID: | 56112 |
Gene Name: | protocadherin gamma subfamily A, 3 |
Gene Aliases: |
PCDH-GAMMA-A3 |
Location: |
Chr.5:141344034-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA3 | NM_018916.3 | NP_061739.2 | ||
AB208927.1 | BAD92164.1 | |||
AF152323.1 | AAD43717.1 |
Target Gene Details
Entrez Gene ID: | 56111 |
Gene Name: | protocadherin gamma subfamily A, 4 |
Gene Aliases: |
PCDH-GAMMA-A4 |
Location: |
Chr.5:141355025-141512979 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA4 | NM_018917.3 | 1 | 730 | NP_061740.2 |
NM_032053.2 | 1 | 730 | NP_114442.2 | |
AF152324.1 | 1 | 554 | AAD43718.1 | |
AF152511.1 | 1 | 554 | AAD43771.1 |
Target Gene Details
Entrez Gene ID: | 56104 |
Gene Name: | protocadherin gamma subfamily B, 1 |
Gene Aliases: |
PCDH-GAMMA-B1 |
Location: |
Chr.5:141350261-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB1 | NM_018922.2 | NP_061745.1 | ||
AF152330.1 | AAD43724.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2759382 | Chr.5:140777355 - 141449115 on Build GRCh38 | Gain | PCDHGA7 PCDHGB6 PCDHB10 PCDHB17P PCDHB8 PCDHGA12 PCDHB6 PCDHGB4 PCDHB19P PCDHGA10 PCDHB3 PCDHGB5 PCDHA11 PCDHA2 PCDHB16 PCDHA3 PCDHA8 PCDHGB1 PCDHB9 PCDHA4 PCDHB4 PCDHGB2 PCDHGB3 PCDHGA11 PCDHGB7 PCDHGA2 PCDHA5 PCDHA7 PCDHB15 PCDHB12 PCDHB5 PCDHGA3 LOC101926905 PCDHA1 PCDHB1 PCDHB13 PCDHGA9 PCDHB14 PCDHA10 PCDHGA6 PCDHGA4 PCDHGA1 PCDHA9 PCDHGB8P PCDHB2 PCDHAC1 PCDHB7 PCDHA6 PCDHGA8 PCDHB11 PCDHB18P TAF7 SLC25A2 PCDHAC2 PCDHA12 PCDHA13 PCDHGA5 |
esv3606982 | Chr.5:141352280 - 141361411 on Build GRCh38 | Loss | PCDHGA2 PCDHGA4 PCDHGB2 PCDHGA1 PCDHGB1 PCDHGA3 |
nsv599922 | Chr.5:141341879 - 141416532 on Build GRCh38 | Loss | PCDHGA2 PCDHGA7 PCDHGB6 PCDHGA4 PCDHGA1 PCDHGB1 PCDHGB4 PCDHGA3 PCDHGA10 PCDHGA8 PCDHGB2 PCDHGB5 PCDHGA9 PCDHGB3 PCDHGA6 PCDHGA5 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |