Assay Details
Target Gene Details
Entrez Gene ID: | 58191 |
Gene Name: | C-X-C motif chemokine ligand 16 |
Gene Aliases: |
CXCLG16, SR-PSOX, SRPSOX |
Location: |
Chr.17:4733529-4739928 on Build GRCh38 |
Assay Gene Location: | Within Exon 6 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CXCL16 | NM_022059.3 | 6 | 2054 | NP_071342.2 |
AF275260.1 | 6 | 1565 | AAG31750.1 | |
AF301016.1 | 6 | 1945 | AAG34365.1 | |
AF337812.1 | 6 | 1479 | AAK38275.1 | |
AK027389.1 | 6 | 1972 | BAB55078.1 | |
AW264069.1 | ||||
BC044930.1 | 6 | 1749 | AAH44930.1 | |
JC209418.1 | 6 | 2054 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv574273 | Chr.17:4585589 - 5460332 on Build GRCh38 | Gain | INCA1 USP6 MIR6865 DHX33 PLD2 ARRB2 ZMYND15 LOC400568 LOC101927979 ZNF594 CAMTA2 SMTNL2 C1QBP ZNF232 LOC100130950 MED11 GLTPD2 PSMB6 RPAIN NUP88 LOC102724009 PFN1 C17orf107 TM4SF5 MIR6864 SPAG7 SLC25A11 CHRNE PELP1 ALOX15 LOC101559451 ZFP3 RABEP1 LOC101928000 LOC107984973 ENO3 MINK1 CXCL16 VMO1 KIF1C GP1BA SCIMP SLC52A1 RNF167 |
nsv833346 | Chr.17:4646256 - 4860871 on Build GRCh38 | Loss | PSMB6 PLD2 ARRB2 ZMYND15 TM4SF5 PELP1 LOC101559451 MED11 LOC107984973 MINK1 CXCL16 VMO1 GLTPD2 |
nsv1952 | Chr.17:4726245 - 4748889 on Build GRCh38 | Insertion | ZMYND15 MED11 CXCL16 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |