Assay Details
Target Gene Details
Entrez Gene ID: | 56114 |
Gene Name: | protocadherin gamma subfamily A, 1 |
Gene Aliases: |
PCDH-GAMMA-A1 |
Location: |
Chr.5:141330685-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA1 | NM_018912.2 | NP_061735.1 | ||
AF152318.1 | AAD43712.1 |
Target Gene Details
Entrez Gene ID: | 56106 |
Gene Name: | protocadherin gamma subfamily A, 10 |
Gene Aliases: |
PCDH-GAMMA-A10 |
Location: |
Chr.5:141413176-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA10 | NM_018913.2 | NP_061736.1 | ||
AF152319.1 | AAD43713.1 |
Target Gene Details
Entrez Gene ID: | 56105 |
Gene Name: | protocadherin gamma subfamily A, 11 |
Gene Aliases: |
PCDH-GAMMA-A11 |
Location: |
Chr.5:141420970-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA11 | NM_018914.2 | NP_061737.1 | ||
NM_032092.1 | NP_114481.1 | |||
AF152320.1 | AAD43714.1 | |||
AF152504.1 | AAD43765.1 | |||
BC136781.1 | ||||
BC171774.1 |
Target Gene Details
Entrez Gene ID: | 26025 |
Gene Name: | protocadherin gamma subfamily A, 12 |
Gene Aliases: |
CDH21, FIB3, PCDH-GAMMA-A12 |
Location: |
Chr.5:141430591-141512979 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA12 | NM_003735.2 | 1 | 496 | NP_003726.1 |
NM_032094.1 | 1 | 496 | NP_115265.1 | |
AB011160.1 | 1 | 469 | ||
AF152321.1 | 1 | 327 | AAD43715.1 | |
AF152506.1 | 1 | 327 | AAD43767.1 | |
AY358946.1 | 1 | 696 | AAQ89305.1 |
Target Gene Details
Entrez Gene ID: | 56113 |
Gene Name: | protocadherin gamma subfamily A, 2 |
Gene Aliases: |
PCDH-GAMMA-A2 |
Location: |
Chr.5:141338760-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA2 | NM_018915.3 | NP_061738.1 | ||
AF152322.1 | AAD43716.1 |
Target Gene Details
Entrez Gene ID: | 56112 |
Gene Name: | protocadherin gamma subfamily A, 3 |
Gene Aliases: |
PCDH-GAMMA-A3 |
Location: |
Chr.5:141344034-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA3 | NM_018916.3 | NP_061739.2 | ||
AB208927.1 | BAD92164.1 | |||
AF152323.1 | AAD43717.1 |
Target Gene Details
Entrez Gene ID: | 56111 |
Gene Name: | protocadherin gamma subfamily A, 4 |
Gene Aliases: |
PCDH-GAMMA-A4 |
Location: |
Chr.5:141355025-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA4 | NM_018917.3 | NP_061740.2 | ||
AF152324.1 | AAD43718.1 |
Target Gene Details
Entrez Gene ID: | 56110 |
Gene Name: | protocadherin gamma subfamily A, 5 |
Gene Aliases: |
CDH-GAMMA-A5, ME3, PCDH-GAMMA-A5 |
Location: |
Chr.5:141364331-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA5 | NM_018918.2 | NP_061741.1 | ||
AF152325.1 | AAD43719.1 |
Target Gene Details
Entrez Gene ID: | 56109 |
Gene Name: | protocadherin gamma subfamily A, 6 |
Gene Aliases: |
PCDH-GAMMA-A6 |
Location: |
Chr.5:141374084-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA6 | NM_018919.2 | NP_061742.1 | ||
AB209178.1 | BAD92415.1 | |||
AF152326.1 | AAD43720.1 | |||
BC146651.1 |
Target Gene Details
Entrez Gene ID: | 56108 |
Gene Name: | protocadherin gamma subfamily A, 7 |
Gene Aliases: |
PCDH-GAMMA-A7 |
Location: |
Chr.5:141382739-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA7 | NM_018920.3 | NP_061743.1 | ||
AB208958.1 | BAD92195.1 | |||
AF152327.1 | AAD43721.1 |
Target Gene Details
Entrez Gene ID: | 9708 |
Gene Name: | protocadherin gamma subfamily A, 8 |
Gene Aliases: |
PCDH-GAMMA-A8 |
Location: |
Chr.5:141391916-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA8 | NM_032088.1 | NP_114477.1 | ||
AF152328.1 | AAD43722.1 |
Target Gene Details
Entrez Gene ID: | 56107 |
Gene Name: | protocadherin gamma subfamily A, 9 |
Gene Aliases: |
PCDH-GAMMA-A9 |
Location: |
Chr.5:141402953-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA9 | NM_018921.2 | NP_061744.1 | ||
AF152329.1 | AAD43723.1 |
Target Gene Details
Entrez Gene ID: | 56104 |
Gene Name: | protocadherin gamma subfamily B, 1 |
Gene Aliases: |
PCDH-GAMMA-B1 |
Location: |
Chr.5:141350261-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB1 | NM_018922.2 | NP_061745.1 | ||
AF152330.1 | AAD43724.1 |
Target Gene Details
Entrez Gene ID: | 56103 |
Gene Name: | protocadherin gamma subfamily B, 2 |
Gene Aliases: |
PCDH-GAMMA-B2 |
Location: |
Chr.5:141360136-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB2 | NM_018923.2 | NP_061746.1 | ||
AF152331.1 | AAD43725.1 |
Target Gene Details
Entrez Gene ID: | 56102 |
Gene Name: | protocadherin gamma subfamily B, 3 |
Gene Aliases: |
PCDH-GAMMA-B3 |
Location: |
Chr.5:141370264-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB3 | NM_018924.4 | NP_061747.2 | ||
AF152332.1 | AAD43726.1 | |||
BC150172.1 |
Target Gene Details
Entrez Gene ID: | 8641 |
Gene Name: | protocadherin gamma subfamily B, 4 |
Gene Aliases: |
CDH20, FIB2, PCDH-GAMMA-B4 |
Location: |
Chr.5:141387885-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB4 | NM_003736.2 | NP_003727.1 | ||
AF152333.1 | AAD43727.1 |
Target Gene Details
Entrez Gene ID: | 56101 |
Gene Name: | protocadherin gamma subfamily B, 5 |
Gene Aliases: |
PCDH-GAMMA-B5 |
Location: |
Chr.5:141398128-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB5 | NM_018925.2 | NP_061748.1 | ||
AF152334.1 | AAD43728.1 |
Target Gene Details
Entrez Gene ID: | 56100 |
Gene Name: | protocadherin gamma subfamily B, 6 |
Gene Aliases: |
PCDH-GAMMA-B6 |
Location: |
Chr.5:141408203-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB6 | NM_018926.2 | NP_061749.1 | ||
AF152335.1 | AAD43729.1 |
Target Gene Details
Entrez Gene ID: | 56099 |
Gene Name: | protocadherin gamma subfamily B, 7 |
Gene Aliases: |
ME6, PCDH-GAMMA-B7 |
Location: |
Chr.5:141417647-141512981 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB7 | NM_018927.3 | NP_061750.1 | ||
AF152336.1 | AAD43730.1 | |||
BC051788.2 | AAH51788.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2759382 | Chr.5:140777355 - 141449115 on Build GRCh38 | Gain | PCDHGA7 PCDHGA1 LOC101926905 PCDHGA10 PCDHGA6 PCDHAC1 PCDHB13 PCDHGB3 PCDHA8 PCDHGB7 PCDHB2 PCDHA5 PCDHGB2 PCDHGA12 PCDHA6 PCDHGB1 PCDHB9 PCDHB12 PCDHA10 PCDHGA8 PCDHGA5 PCDHA13 PCDHB18P PCDHA7 PCDHGA4 PCDHB10 PCDHB4 PCDHGA2 PCDHGA3 PCDHB17P PCDHB5 PCDHB14 PCDHA2 PCDHA4 PCDHA12 PCDHA9 SLC25A2 PCDHAC2 PCDHB7 PCDHGB4 PCDHB6 PCDHB15 PCDHA1 PCDHB3 PCDHB19P PCDHB16 PCDHGB5 PCDHB1 PCDHB8 PCDHA3 PCDHA11 TAF7 PCDHB11 PCDHGA11 PCDHGB6 PCDHGB8P PCDHGA9 |
esv2730847 | Chr.5:141415403 - 141432967 on Build GRCh38 | Deletion | PCDHGA7 PCDHGB4 PCDHGA1 PCDHGA4 PCDHGB2 PCDHGA10 PCDHGB5 PCDHGA6 PCDHGA12 PCDHGB3 PCDHGB1 PCDHGA2 PCDHGB7 PCDHGA3 PCDHGA11 PCDHGB6 PCDHGA8 PCDHGB8P PCDHGA5 PCDHGA9 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |