Assay Details
Target Gene Details
Entrez Gene ID: | 29855 |
Gene Name: | ubinuclein 1 |
Gene Aliases: |
VT, VT4 |
Location: |
Chr.16:4846665-4882401 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 3 - Exon 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
UBN1 | NM_001079514.2 | NP_001072982.1 | ||
NM_001288656.1 | NP_001275585.1 | |||
XM_005255277.3 | XP_005255334.1 | |||
XM_005255278.3 | XP_005255335.1 | |||
XM_005255279.3 | XP_005255336.1 | |||
XM_011522465.1 | XP_011520767.1 | |||
XM_011522467.1 | XP_011520769.1 | |||
XM_017023189.1 | XP_016878678.1 | |||
XM_017023190.1 | XP_016878679.1 | |||
XM_017023192.1 | XP_016878681.1 | |||
AF108460.1 | AAF31755.1 | |||
AF108461.1 | AAF31756.1 | |||
AK056282.1 | ||||
AK300131.1 | ||||
AW385352.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv25186 | Chr.16:4858500 - 5142800 on Build GRCh38 | Gain | UBN1 C16orf89 EEF2KMT NAGPA ALG1 NAGPA-AS1 PPL SEC14L5 |
esv2422516 | Chr.16:4775920 - 5160979 on Build GRCh38 | Deletion | SEPT12 UBN1 C16orf89 EEF2KMT NAGPA ALG1 NAGPA-AS1 GLYR1 SMIM22 ROGDI PPL SEC14L5 |
nsv510674 | Chr.16:4832446 - 4882731 on Build GRCh38 | Deletion | UBN1 GLYR1 PPL |
nsv1046986 | Chr.16:4049000 - 5555721 on Build GRCh38 | Gain | CORO7-PAM16 CDIP1 ADCY9 EEF2KMT RBFOX1 ZNF500 VASN DNAJA3 C16orf96 SMIM22 SEC14L5 GLIS2 MIR6769A SRL NAGPA C16orf71 NUDT16L1 LOC105371063 PAM16 ALG1 NAGPA-AS1 PPL NMRAL1 SEPT12 C16orf89 TFAP4 GLYR1 UBALD1 MGRN1 UBN1 GLIS2-AS1 ANKS3 HMOX2 CORO7 ROGDI LINC01569 |
esv3637707 | Chr.16:4823818 - 4874308 on Build GRCh38 | Gain | UBN1 GLYR1 |
nsv1720 | Chr.16:4854258 - 4900577 on Build GRCh38 | Deletion | UBN1 PPL |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |