Assay Details
Target Gene Details
Entrez Gene ID: | 6560 |
Gene Name: | solute carrier family 12 member 4 |
Gene Aliases: |
CTC-479C5.17, KCC1, hKCC1 |
Location: |
Chr.16:67943474-67968694 on Build GRCh38 |
Assay Gene Location: | Within Exon 26 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLC12A4 | NM_001145961.1 | 24 | 3723 | NP_001139433.1 |
NM_001145962.1 | 23 | 3646 | NP_001139434.1 | |
NM_001145963.1 | 24 | 3620 | NP_001139435.1 | |
NM_001145964.1 | 24 | 3611 | NP_001139436.1 | |
NM_005072.4 | 24 | 3741 | NP_005063.1 | |
AF047338.1 | AAC32815.1 | |||
AF054505.1 | AAC39684.1 | |||
AF054506.1 | AAC39685.1 | |||
AK026911.1 | 16 | 2379 | ||
AK097808.1 | 17 | 2349 | ||
AK293906.1 | ||||
AK293956.1 | 23 | 3536 | ||
AK299042.1 | ||||
AK310027.1 | ||||
BC021193.2 | 24 | 3669 | AAH21193.1 | |
CF272417.1 | 2 | 462 | ||
U55054.1 | 24 | 3655 | AAC50563.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv522852 | Chr.16:67153308 - 68071571 on Build GRCh38 | Gain | ELMO3 PARD6A SLC9A5 ATP6V0D1 PSKH1 HSD11B2 HSF4 KCTD19 C16orf86 DPEP2 KIAA0895L FAM65A GFOD2 EXOC3L1 CENPT NUTF2 NOL3 EDC4 PLEKHG4 TRADD ACD FBXL8 DDX28 FHOD1 CTCF TSNAXIP1 CARMIL2 LRRC36 DUS2 AGRP MIR328 TMEM208 ZDHHC1 NRN1L DPEP3 LOC105369155 LOC100131303 LOC100505942 LRRC29 ENKD1 CTRL PSMB10 RANBP10 LCAT E2F4 LOC107984813 THAP11 TPPP3 SLC12A4 |
nsv524363 | Chr.16:67136529 - 68071571 on Build GRCh38 | Loss | ELMO3 PARD6A SLC9A5 ATP6V0D1 PSKH1 HSD11B2 C16orf70 HSF4 KCTD19 C16orf86 DPEP2 KIAA0895L FAM65A GFOD2 EXOC3L1 CENPT NUTF2 NOL3 B3GNT9 EDC4 PLEKHG4 TRADD ACD FBXL8 DDX28 FHOD1 CTCF TSNAXIP1 CARMIL2 LRRC36 DUS2 AGRP MIR328 TMEM208 ZDHHC1 NRN1L DPEP3 LOC105369155 LOC100131303 LOC100505942 LRRC29 ENKD1 CTRL PSMB10 RANBP10 LCAT E2F4 LOC107984813 THAP11 TPPP3 SLC12A4 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |