Assay Details
Target Gene Details
Entrez Gene ID: | 2735 |
Gene Name: | GLI family zinc finger 1 |
Gene Aliases: |
GLI |
Location: |
Chr.12:57460135-57472268 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 9 - Exon 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GLI1 | NM_001160045.1 | NP_001153517.1 | ||
NM_001167609.1 | NP_001161081.1 | |||
NM_005269.2 | NP_005260.1 | |||
XM_011538189.2 | XP_011536491.1 | |||
XM_011538190.1 | XP_011536492.1 | |||
AK297899.1 | ||||
BC013000.2 | AAH13000.1 | |||
GQ890670.2 | ||||
X07384.1 | CAA30297.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv428283 | Chr.12:57435950 - 57608085 on Build GRCh38 | Gain | INHBE GLI1 PIP4K2C DCTN2 DDIT3 MIR616 MARS MIR6758 MBD6 ARHGAP9 INHBC KIF5A DTX3 |
nsv559034 | Chr.12:57466149 - 57618450 on Build GRCh38 | Loss | GLI1 PIP4K2C DCTN2 DDIT3 MIR616 MARS ARHGEF25 LOC101927583 MIR6758 MBD6 ARHGAP9 KIF5A DTX3 |
nsv469411 | Chr.12:57450266 - 57527405 on Build GRCh38 | Loss | ARHGAP9 INHBC INHBE GLI1 DDIT3 MIR616 MARS MIR6758 MBD6 |
nsv482992 | Chr.12:56206217 - 57706217 on Build GRCh38 | Gain+Loss | INHBE NAB2 MYO1A DDIT3 IL23A HBCBP SNORA105C ARHGAP9 SLC26A10 RDH16 HSD17B6 NABP2 LRP1-AS NACA STAC3 SDR9C7 PIP4K2C NXPH4 RNF41 MIR616 MARS ARHGEF25 ANKRD52 GLS2 R3HDM2 RBMS2 TAC3 KIF5A STAT6 DTX3 NDUFA4L2 LRP1 STAT2 COQ10A OS9 PAN2 LOC101927583 ATP5B MIP INHBC SLC39A5 SNORD59A MIR1228 APOF TIMELESS PTGES3 SPRYD4 GPR182 GLI1 PRIM1 DCTN2 ZBTB39 SNORD59B MIR6758 MBD6 B4GALNT1 CNPY2 NEMP1 SHMT2 BAZ2A CS |
nsv559035 | Chr.12:57467189 - 57476865 on Build GRCh38 | Loss | ARHGAP9 GLI1 |
nsv8974 | Chr.12:57458996 - 57472098 on Build GRCh38 | Gain | GLI1 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |