Assay Details
Target Gene Details
Entrez Gene ID: | 23645 |
Gene Name: | protein phosphatase 1 regulatory subunit 15A |
Gene Aliases: |
GADD34 |
Location: |
Chr.19:48872392-48876062 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PPP1R15A | NM_014330.3 | 1 | 173 | NP_055145.3 |
AK001361.1 | 1 | 144 | BAA91649.1 | |
AK225632.1 | 1 | 144 | ||
AK296668.1 | 1 | 144 | ||
AK297615.1 | 1 | 144 | ||
AK298765.1 | ||||
AK311366.1 | 1 | 144 | ||
BC003067.2 | 1 | 126 | AAH03067.1 | |
DA484808.1 | 1 | 173 | ||
U83981.1 | 1 | 126 | AAC25631.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv9739 | Chr.19:47901840 - 50143063 on Build GRCh38 | Gain+Loss | SYNGR4 MIR4750 NTN5 BCAT2 PLA2G4C-AS1 SLC6A16 SNAR-C4 GFY SNAR-A13 SNAR-G2 MIR5088 LOC101928295 VRK3 ATF5 BCL2L12 KCNJ14 CYTH2 CGB3 FLT3LG C19orf73 TBC1D17 PLA2G4C HRC SNORD32A RUVBL2 PTH2 FLJ26850 LOC105447645 DHDH IRF3 C19orf68 CGB8 MED25 CARD8 CGB2 MIR6799 SNAR-A11 BAX FGF21 SIGLEC11 CGB7 AP2A1 CCDC155 FUT1 SNORD33 SNAR-G1 DBP MAMSTR RPL18 LIG1 ZNF473 NOSIP LMTK3 GRIN2D IZUMO1 CD37 NUCB1-AS1 SNAR-B1 MIR6798 SNAR-A1 GRWD1 IL4I1 MIR6800 TMEM143 FTL SNAR-A5 DKKL1 FAM83E ADM5 SNAR-A3 SNAR-C1 SNAR-A12 SNAR-D FUZ TSKS LOC101059948 TULP2 MIR150 CPT1C SNAR-C2 SNORD35A SNAR-A7 PTOV1-AS2 CCDC114 MIR4751 ELSPBP1 PNKP SULT2B1 SNAR-C5 SNAR-A9 SCAF1 CARD8-AS1 SNAR-A4 MIR4749 PTOV1-AS1 PPFIA3 SEC1P CABP5 PRMT1 PIH1D1 TEAD2 LHB HSD17B14 NUP62 PRRG2 SLC17A7 SNRNP70 RPS11 NTF4 MIR4324 LOC100287477 SNORD35B SNAR-A6 SNAR-A14 SNAR-A2 KCNA7 GYS1 EMP3 RASIP1 SNORD34 SIGLEC16 SPHK2 RCN3 RPL13A SNAR-C3 SNAR-B2 ZNF114 TRPM4 PTOV1 PPP1R15A LOC105372430 CGB1 FUT2 SNAR-A10 RRAS SNAR-A8 AKT1S1 FCGRT SPACA4 NUCB1 ALDH16A1 PRR12 CA11 PLEKHA4 KDELR1 LIN7B CGB5 BSPH1 |
nsv470148 | Chr.19:48865586 - 48906934 on Build GRCh38 | Gain | PLEKHA4 TULP2 PPP1R15A NUCB1 |
nsv833856 | Chr.19:48847866 - 48986483 on Build GRCh38 | Loss | FTL PLEKHA4 NUCB1-AS1 TULP2 PPP1R15A NUCB1 BAX GYS1 DHDH |
nsv833855 | Chr.19:48750098 - 48949781 on Build GRCh38 | Loss | FGF21 FUT1 BCAT2 PLEKHA4 NUCB1-AS1 TULP2 HSD17B14 PPP1R15A NUCB1 DHDH |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |