Assay Details
Target Gene Details
Entrez Gene ID: | 56114 |
Gene Name: | protocadherin gamma subfamily A, 1 |
Gene Aliases: |
PCDH-GAMMA-A1 |
Location: |
Chr.5:141330685-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA1 | NM_018912.2 | NP_061735.1 | ||
AF152318.1 | AAD43712.1 |
Target Gene Details
Entrez Gene ID: | 56113 |
Gene Name: | protocadherin gamma subfamily A, 2 |
Gene Aliases: |
PCDH-GAMMA-A2 |
Location: |
Chr.5:141338760-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA2 | NM_018915.3 | NP_061738.1 | ||
AF152322.1 | AAD43716.1 |
Target Gene Details
Entrez Gene ID: | 56112 |
Gene Name: | protocadherin gamma subfamily A, 3 |
Gene Aliases: |
PCDH-GAMMA-A3 |
Location: |
Chr.5:141344034-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA3 | NM_018916.3 | NP_061739.2 | ||
AB208927.1 | BAD92164.1 | |||
AF152323.1 | AAD43717.1 |
Target Gene Details
Entrez Gene ID: | 56111 |
Gene Name: | protocadherin gamma subfamily A, 4 |
Gene Aliases: |
PCDH-GAMMA-A4 |
Location: |
Chr.5:141355025-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGA4 | NM_018917.3 | NP_061740.2 | ||
AF152324.1 | AAD43718.1 |
Target Gene Details
Entrez Gene ID: | 56104 |
Gene Name: | protocadherin gamma subfamily B, 1 |
Gene Aliases: |
PCDH-GAMMA-B1 |
Location: |
Chr.5:141350261-141512979 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB1 | NM_018922.2 | NP_061745.1 | ||
AF152330.1 | AAD43724.1 |
Target Gene Details
Entrez Gene ID: | 56103 |
Gene Name: | protocadherin gamma subfamily B, 2 |
Gene Aliases: |
PCDH-GAMMA-B2 |
Location: |
Chr.5:141360136-141512979 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PCDHGB2 | NM_018923.2 | 1 | 671 | NP_061746.1 |
NM_032096.1 | 1 | 671 | NP_115267.1 | |
AF152331.1 | 1 | 671 | AAD43725.1 | |
AF152518.1 | 1 | 671 | AAD43778.1 | |
BC101805.1 | 1 | 734 | AAI01806.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2759382 | Chr.5:140777355 - 141449115 on Build GRCh38 | Gain | PCDHGB7 PCDHB18P PCDHAC1 PCDHB16 PCDHA10 PCDHB10 PCDHA11 PCDHB6 PCDHGB3 PCDHB1 LOC101926905 PCDHGA6 PCDHA2 PCDHB8 TAF7 PCDHGB4 PCDHA3 PCDHAC2 PCDHA12 PCDHB2 PCDHGA1 PCDHGB1 PCDHB4 SLC25A2 PCDHGA8 PCDHA5 PCDHA6 PCDHB9 PCDHGA10 PCDHGA7 PCDHB7 PCDHGA3 PCDHB12 PCDHGB6 PCDHA7 PCDHB14 PCDHGB2 PCDHB19P PCDHA9 PCDHGB8P PCDHB11 PCDHA1 PCDHGA4 PCDHB3 PCDHA8 PCDHB13 PCDHB15 PCDHGA2 PCDHGB5 PCDHA4 PCDHGA12 PCDHGA5 PCDHGA11 PCDHGA9 PCDHB17P PCDHB5 PCDHA13 |
esv3606982 | Chr.5:141352280 - 141361411 on Build GRCh38 | Loss | PCDHGA1 PCDHGA4 PCDHGB1 PCDHGA3 PCDHGA2 PCDHGB2 |
nsv599922 | Chr.5:141341879 - 141416532 on Build GRCh38 | Loss | PCDHGA4 PCDHGA10 PCDHGA7 PCDHGA3 PCDHGB4 PCDHGA2 PCDHGB5 PCDHGB6 PCDHGA5 PCDHGB2 PCDHGA1 PCDHGB1 PCDHGA9 PCDHGA8 PCDHGB3 PCDHGA6 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |