Assay Details
Target Gene Details
Entrez Gene ID: | 10732 |
Gene Name: | transcription factor like 5 |
Gene Aliases: |
CHA, E2BP-1, Figlb, bHLHe82 |
Location: |
Chr.20:62841014-62861763 on Build GRCh38 |
Assay Gene Location: | Within Exon 8 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TCFL5 | NM_006602.3 | 6 | 1812 | NP_006593.2 |
XM_005260185.3 | 6 | 1716 | XP_005260242.1 | |
AB012124.1 | 6 | 1673 | BAA36557.1 | |
AF070992.1 | 6 | 1650 | AAD53986.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv834027 | Chr.20:62707655 - 62874914 on Build GRCh38 | Loss | OGFR-AS1 DPH3P1 TCFL5 NTSR1 LOC107985428 LINC00659 MRGBP OGFR LOC107987285 COL9A3 |
nsv828794 | Chr.20:62832958 - 62880035 on Build GRCh38 | Loss | DIDO1 DPH3P1 TCFL5 COL9A3 |
nsv9825 | Chr.20:62775470 - 63601330 on Build GRCh38 | Gain | EEF1A2 LOC107985425 SRMS HELZ2 SLC17A9 COL20A1 HAR1A BIRC7 PPDPF BHLHE23 LINC00029 PTK6 DPH3P1 LOC63930 TCFL5 NKAIN4 LOC107985428 HAR1B MRGBP MIR124-3 GMEB2 MIR4326 LOC100130587 LINC01056 GID8 KCNQ2 DIDO1 LOC100130152 ARFGAP1 FNDC11 OGFR MIR3196 CHRNA4 FLJ16779 YTHDF1 LOC102723788 OGFR-AS1 LINC00659 COL9A3 |
nsv428380 | Chr.20:62632018 - 62935383 on Build GRCh38 | Loss | DIDO1 OGFR LOC107987285 SLCO4A1-AS1 SLCO4A1 OGFR-AS1 DPH3P1 TCFL5 NTSR1 LOC107985428 LINC00659 MRGBP COL9A3 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |