Assay Details
Target Gene Details
Entrez Gene ID: | 81889 |
Gene Name: | fumarylacetoacetate hydrolase domain containing 1 |
Gene Aliases: |
C16orf36, YISKL |
Location: |
Chr.16:1827224-1840207 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
FAHD1 | NM_001018104.2 | NP_001018114.1 | ||
NM_001142398.1 | NP_001135870.1 | |||
BC063017.1 | AAH63017.1 |
Target Gene Details
Entrez Gene ID: | 254528 |
Gene Name: | meiosis specific with OB domains |
Gene Aliases: |
C16orf73, gs129 |
Location: |
Chr.16:1833983-1872178 on Build GRCh38 |
Assay Gene Location: | Within Exon 14 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
MEIOB | NM_001163560.2 | 14 | 1810 | NP_001157032.1 |
NM_152764.2 | 13 | 1646 | NP_689977.2 | |
BC029829.1 | 9 | 1248 | AAH29829.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv517196 | Chr.16:1729694 - 1844960 on Build GRCh38 | Gain+Loss | MEIOB MAPK8IP3 NUBP2 NME3 EME2 SPSB3 FAHD1 MRPS34 MIR3177 IGFALS HAGH |
nsv571175 | Chr.16:1806439 - 1875278 on Build GRCh38 | Loss | MEIOB FAHD1 HAGH |
nsv1040440 | Chr.16:1811739 - 1866102 on Build GRCh38 | Gain | MEIOB FAHD1 HAGH |
esv2422427 | Chr.16:10001 - 2723164 on Build GRCh38 | Duplication | PRSS29P CEMP1 DNASE1L2 LUC7L NTN3 RAB26 RGS11 SNHG19 HBZ GNG13 SNORA10 RPUSD1 POLR3K TMEM8A SNORD60 TMEM204 TSC2 TRAF7 ARHGDIG PRSS27 FAM173A MEIOB EME2 SPSB3 BAIAP3 GNPTG TPSAB1 UNKL MIR940 TPSD1 LOC652276 SOX8 TBL3 LINC00235 MIR6767 MAPK8IP3 NME3 LOC100287175 CACNA1H LOC729652 HBA1 RHBDF1 JMJD8 SNRNP25 NUBP2 MIR6768 MRPL28 TBC1D24 CASKIN1 LOC105371049 TSR3 CHTF18 ERVK13-1 RHOT2 MCRIP2 LOC105371046 MIR5587 FAM234A FLJ42627 HBQ1 HBM C1QTNF8 PTX4 METTL26 NPW MIR4717 MIR6859-4 PKD1 ECI1 NOXO1 TPSG1 SNHG9 CRAMP1 RAB11FIP3 CAPN15 PDPK1 LOC105371184 MLST8 STUB1 PGP ATP6V0C LOC107987233 NPRL3 MIR3180-5 MIR3677 RAB40C CCNF MIR3178 WDR24 SLC9A3R2 MIR3176 RPL3L ABCA3 MIR662 E4F1 MIR4516 NARFL TPSB2 RNPS1 AXIN1 ZNF598 WFIKKN1 PIGQ HAGH GFER MSLN LOC100134368 NDUFB10 LOC105371045 LOC105371047 MIR3177 METRN LMF1 SNORA78 C16orf91 CLCN7 PRR35 SSTR5 RPL23AP5 NHLRC4 PRR25 IGFALS MPG IFT140 CCDC154 LOC107984876 MRPS34 DDX11L10 RNF151 HN1L HS3ST6 HBA2 KCTD5 TELO2 PDIA2 SNORA64 MIR1225 DECR2 LOC105371038 FBXL16 WDR90 CCDC78 MSRB1 RHBDL1 LMF1-AS1 SSTR5-AS1 LOC106660606 WASIR2 MIR6511B1 LOC101929280 RPS2 NTHL1 HAGHL SYNGR3 ABCA17P AMDHD2 UBE2I FAHD1 LINC00254 BRICD5 C16orf59 NME4 |
nsv1051692 | Chr.16:1505070 - 1866102 on Build GRCh38 | Loss | MEIOB NUBP2 IFT140 EME2 CRAMP1 SPSB3 MRPS34 HAGH LOC105371046 HN1L MAPK8IP3 NME3 TMEM204 FAHD1 TELO2 LOC105371047 MIR3177 IGFALS |
nsv1042986 | Chr.16:1784723 - 1866102 on Build GRCh38 | Loss | MEIOB NUBP2 FAHD1 IGFALS HAGH |
nsv518641 | Chr.16:1645775 - 1835631 on Build GRCh38 | Loss | MEIOB NUBP2 EME2 CRAMP1 SPSB3 MRPS34 HAGH HN1L MAPK8IP3 NME3 FAHD1 MIR3177 IGFALS |
nsv457337 | Chr.16:1813519 - 1855005 on Build GRCh38 | Loss | MEIOB FAHD1 HAGH |
nsv571177 | Chr.16:1817039 - 1897015 on Build GRCh38 | Gain | MEIOB FAHD1 LINC00254 HAGH |
dgv778e212 | Chr.16:1831071 - 1834086 on Build GRCh38 | Loss | MEIOB FAHD1 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |