Assay Details
Target Gene Details
Entrez Gene ID: | 57333 |
Gene Name: | reticulocalbin 3 |
Gene Aliases: |
RLP49 |
Location: |
Chr.19:49527579-49543638 on Build GRCh38 |
Assay Gene Location: | Within Exon 7 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
RCN3 | NM_020650.2 | 7 | 1818 | NP_065701.2 |
XM_005259089.3 | 8 | 1913 | XP_005259146.1 | |
XM_011527143.1 | 8 | 2007 | XP_011525445.1 | |
XM_017027023.1 | 7 | 2092 | XP_016882512.1 | |
AF183423.1 | 6 | 1403 | AAG09692.1 | |
AY195859.1 | 7 | 1818 | AAO43054.1 | |
AY358423.1 | 7 | 1405 | AAQ88789.1 | |
BC013436.1 | 7 | 1401 | AAH13436.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv9739 | Chr.19:47901840 - 50143063 on Build GRCh38 | Gain+Loss | SNAR-A12 FAM83E SPHK2 DHDH CD37 LMTK3 MIR6798 TULP2 FGF21 PPFIA3 MIR6799 MIR4750 SNAR-C5 SNAR-C4 SNAR-C3 SNAR-A5 ZNF473 BSPH1 TMEM143 SNAR-A10 BCAT2 DKKL1 FUT2 MIR150 IZUMO1 SNRNP70 PTOV1 LOC100287477 IRF3 LOC101928295 SPACA4 CGB1 KCNJ14 SNAR-A6 GRIN2D C19orf73 SEC1P BAX NUP62 MIR4749 SNORD32A NUCB1 GYS1 SNAR-D CGB2 LIG1 SYNGR4 CGB7 LIN7B SCAF1 CARD8-AS1 MIR6800 SNAR-A11 PPP1R15A ALDH16A1 AKT1S1 MED25 MIR4324 LOC105372430 MIR5088 TEAD2 SNAR-A13 PRRG2 KCNA7 LOC105447645 PLEKHA4 PNKP KDELR1 SNAR-A7 SIGLEC16 DBP PLA2G4C-AS1 GRWD1 SNAR-G1 CCDC155 RPL18 FLJ26850 TBC1D17 CGB8 ZNF114 PRMT1 RASIP1 SNAR-B1 RCN3 SNAR-A14 PTOV1-AS2 ATF5 SNAR-G2 SLC6A16 SNAR-A1 SNORD35B PRR12 PTOV1-AS1 ELSPBP1 CPT1C PIH1D1 SNAR-C2 FUZ SNORD33 CA11 SNAR-C1 IL4I1 TRPM4 FUT1 RPL13A SNORD34 MIR4751 SLC17A7 HRC LOC101059948 NUCB1-AS1 BCL2L12 CGB5 SNAR-A2 TSKS CABP5 SIGLEC11 HSD17B14 NOSIP FLT3LG CGB3 SNAR-A4 SNAR-A3 FTL VRK3 LHB GFY EMP3 SNAR-A9 CYTH2 CARD8 MAMSTR RRAS PLA2G4C AP2A1 SNAR-B2 C19orf68 ADM5 FCGRT SULT2B1 SNAR-A8 RUVBL2 CCDC114 SNORD35A PTH2 NTN5 RPS11 NTF4 |
nsv833863 | Chr.19:49479177 - 49629716 on Build GRCh38 | Loss | RCN3 RPL13A PRRG2 SNORD34 NOSIP FCGRT FLT3LG SNORD33 SNORD35B PRR12 SNORD35A SNORD32A RPS11 MIR150 |
nsv833862 | Chr.19:49448789 - 49570676 on Build GRCh38 | Loss | RCN3 RPL13A SNORD34 NOSIP FCGRT PIH1D1 FLT3LG SNORD33 SNORD35B ALDH16A1 SNORD35A SNORD32A RPS11 MIR150 |
nsv1160655 | Chr.19:49489110 - 49841830 on Build GRCh38 | Deletion | RCN3 RPL13A SNORD34 BCL2L12 TSKS SCAF1 NOSIP MIR6799 MIR6800 SNORD35B PRR12 PTOV1-AS1 MED25 MIR5088 MIR150 RRAS PRRG2 IRF3 AP2A1 CPT1C ADM5 FCGRT FUZ SNORD33 SNORD35A SNORD32A RPS11 PRMT1 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |