Assay Details
Target Gene Details
Entrez Gene ID: | 54464 |
Gene Name: | 5'-3' exoribonuclease 1 |
Gene Aliases: |
SEP1 |
Location: |
Chr.3:142306607-142448062 on Build GRCh38 |
Assay Gene Location: | Within Exon 43 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
XRN1 | NM_001282857.1 | 41 | 7921 | NP_001269786.1 |
NM_019001.4 | 42 | 7957 | NP_061874.3 | |
XM_011512919.2 | 42 | 7960 | XP_011511221.1 | |
XM_011512920.2 | 41 | 7846 | XP_011511222.1 | |
XM_011512922.2 | 39 | 7591 | XP_011511224.1 | |
XM_017006640.1 | 41 | 7918 | XP_016862129.1 | |
XM_017006641.1 | 40 | 7807 | XP_016862130.1 | |
AL117516.1 | 1 | 1493 | ||
AL133623.1 | 28 | 6049 | CAB63749.1 | |
BX640905.1 | 42 | 7906 | CAE45950.1 | |
CR627160.1 | 1 | 2325 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1011175 | Chr.3:142186135 - 142357719 on Build GRCh38 | Gain |
![]() ![]() |
nsv523945 | Chr.3:142214807 - 142500700 on Build GRCh38 | Gain |
![]() ![]() ![]() |
esv34483 | Chr.3:142135084 - 142375789 on Build GRCh38 | Gain |
![]() ![]() ![]() |
esv2763767 | Chr.3:142102103 - 142382712 on Build GRCh38 | Gain |
![]() ![]() ![]() |
dgv8626n54 | Chr.3:142093917 - 142366468 on Build GRCh38 | Gain |
![]() ![]() ![]() |
dgv4912n100 | Chr.3:142100008 - 142372619 on Build GRCh38 | Gain |
![]() ![]() ![]() |
esv3598001 | Chr.3:142177134 - 142371204 on Build GRCh38 | Gain |
![]() ![]() |
esv3597996 | Chr.3:142099805 - 142311818 on Build GRCh38 | Gain |
![]() ![]() ![]() |
dgv619n27 | Chr.3:142103779 - 142353090 on Build GRCh38 | Gain |
![]() ![]() ![]() |
esv2759182 | Chr.3:142010028 - 142410994 on Build GRCh38 | Gain |
![]() ![]() ![]() |
![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)
More Information
Set Membership: |
![]() ![]() ![]() |
Panther Classification:
Gene Ontology Categories:
![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)