Assay Details
Target Gene Details
Entrez Gene ID: | 126133 |
Gene Name: | aldehyde dehydrogenase 16 family member A1 |
Gene Aliases: |
- |
Location: |
Chr.19:49453216-49471050 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 9 - Intron 9 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
ALDH16A1 | NM_001145396.1 | NP_001138868.1 | ||
NM_153329.3 | NP_699160.2 | |||
XM_011526441.1 | XP_011524743.1 | |||
XM_011526442.1 | XP_011524744.1 | |||
AK074136.1 | BAB84962.1 | |||
AK297101.1 | ||||
AK298587.1 | ||||
AK301246.1 | ||||
BC014895.2 | AAH14895.2 | |||
DC364604.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv2518 | Chr.19:49452273 - 49465137 on Build GRCh38 | Insertion | ALDH16A1 PIH1D1 |
nsv9739 | Chr.19:47901840 - 50143063 on Build GRCh38 | Gain+Loss | FUZ SNAR-C2 TEAD2 FLJ26850 PRRG2 LOC105372430 HRC SNAR-A8 CA11 CCDC155 SNORD35B SIGLEC16 PLEKHA4 NTN5 SLC17A7 MIR4749 NOSIP SNAR-B1 LMTK3 C19orf73 CABP5 FCGRT BAX SULT2B1 TULP2 CCDC114 ELSPBP1 MAMSTR DHDH GYS1 NUCB1 SCAF1 CGB2 CGB3 PPFIA3 SNAR-A3 BCL2L12 SNAR-D LHB NTF4 MED25 SNAR-A1 CGB5 RASIP1 FUT2 ALDH16A1 CPT1C CD37 FGF21 SNORD32A SNAR-A2 TBC1D17 SNAR-A6 GRIN2D LIN7B SNAR-C5 PPP1R15A SNAR-A9 VRK3 SNORD35A CARD8 SNAR-A14 SIGLEC11 SEC1P NUCB1-AS1 SNORD33 TSKS IZUMO1 EMP3 SNAR-A4 MIR4750 SNAR-B2 C19orf68 AKT1S1 KDELR1 DBP PNKP KCNJ14 RPL18 MIR6800 MIR4751 PTOV1 LOC105447645 FAM83E RPL13A SNAR-A10 PTOV1-AS1 IL4I1 CGB1 ADM5 CGB7 FTL SNAR-C4 RUVBL2 SNAR-G2 SNRNP70 KCNA7 PRMT1 LOC100287477 SNAR-A7 TMEM143 SNAR-C1 MIR6799 SNAR-A5 SLC6A16 BCAT2 HSD17B14 SPHK2 LOC101928295 PLA2G4C SNAR-G1 MIR150 PRR12 SPACA4 RCN3 CARD8-AS1 DKKL1 PTH2 CGB8 LIG1 IRF3 FUT1 PTOV1-AS2 PLA2G4C-AS1 MIR6798 CYTH2 SYNGR4 PIH1D1 GFY SNAR-C3 ZNF114 TRPM4 LOC101059948 SNORD34 SNAR-A12 ATF5 AP2A1 MIR4324 SNAR-A13 SNAR-A11 NUP62 RRAS RPS11 MIR5088 GRWD1 BSPH1 ZNF473 FLT3LG |
nsv833862 | Chr.19:49448789 - 49570676 on Build GRCh38 | Loss | MIR150 SNORD33 ALDH16A1 RCN3 PIH1D1 SNORD32A SNORD35B RPL13A NOSIP SNORD34 FCGRT SNORD35A RPS11 FLT3LG |
esv3644624 | Chr.19:49461676 - 49475440 on Build GRCh38 | Gain | ALDH16A1 FLT3LG |
nsv953599 | Chr.19:49386444 - 49506743 on Build GRCh38 | Deletion | MIR150 SNORD33 ALDH16A1 PIH1D1 GFY SNORD32A CCDC155 SNORD35B SLC17A7 RPL13A PTH2 SNORD34 SNORD35A RPS11 LOC101928295 FLT3LG |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |