Assay Details
Target Gene Details
Entrez Gene ID: | 5798 |
Gene Name: | protein tyrosine phosphatase, receptor type N |
Gene Aliases: |
IA-2, IA-2/PTP, IA2, ICA512, R-PTP-N |
Location: |
Chr.2:219289623-219309573 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 24 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PTPRN | NM_001199763.1 | NP_001186692.1 | ||
NM_001199764.1 | NP_001186693.1 | |||
NM_002846.3 | NP_002837.1 | |||
XM_011511566.1 | XP_011509868.1 | |||
XM_017004609.1 | XP_016860098.1 | |||
XM_017004610.1 | XP_016860099.1 | |||
XM_017004611.1 | XP_016860100.1 | |||
XM_017004612.1 | XP_016860101.1 | |||
AB209368.1 | BAD92605.1 | |||
AK054765.1 | ||||
AK122679.1 | ||||
BC007713.2 | AAH07713.2 | |||
BC070053.1 | AAH70053.1 | |||
L18983.1 | AAA90974.1 | |||
X62899.2 | CAA44688.2 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv584501 | Chr.2:219260522 - 219323181 on Build GRCh38 | Loss | TUBA4B PTPRN MIR153-1 DNAJB2 |
nsv527936 | Chr.2:219270486 - 219328674 on Build GRCh38 | Loss | TUBA4B PTPRN MIR153-1 RESP18 DNAJB2 |
nsv834543 | Chr.2:219226398 - 219416430 on Build GRCh38 | Loss | TUBA4B ATG9A PTPRN GLB1L STK16 TUBA4A MIR153-1 RESP18 ANKZF1 DNPEP DNAJB2 |
nsv508885 | Chr.2:219231225 - 219333602 on Build GRCh38 | Insertion | TUBA4B PTPRN GLB1L STK16 TUBA4A MIR153-1 RESP18 ANKZF1 DNAJB2 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |